RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 ZNF705FA8MVS1 300 aaPredicted RBP10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 MIFP14174 115 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 SELENOTP62341 195 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 RAB32Q13637 225 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 VWC2Q2TAL6 325 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 MORN5Q5VZ52 161 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 TEPPQ6URK8 271 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 AMTNQ6UX39 209 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 NRARPQ7Z6K4 114 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 PPP1R14BQ96C90 147 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 LINC00052Q96N35 136 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 RSG1Q9BU20 258 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 HRH4Q9H3N8 390 aa10.52□□□□□ -0.72
PPP1CA-201ENST00000312989 A0A087X0K7 114 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 IGSF23A1L1A6 192 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 FAM25EA8MYX2 175 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 AGPAT2O15120 278 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 HYPMO75409 117 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 JTBO76095 146 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 GALR1P47211 349 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 MEOX2P50222 304 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 IGFL4Q6B9Z1 124 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 MZT2BQ6NZ67 158 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 C11orf45Q8TAV5 145 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 TMEM37Q8WXS4 190 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 SLC35B3Q9H1N7 401 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 LYRM2Q9NU23 88 aaPredicted RBP10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 CELA1Q9UNI1 258 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 HIGD1AQ9Y241 93 aa10.52□□□□□ -0.73
PPP1CA-201ENST00000312989 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 C5orf51A6NDU8 294 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 CST7O76096 145 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 ID1P41134 155 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 PRR20EP86478 221 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 PRR20CP86479 221 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 PRR20DP86480 221 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 PRR20BP86481 221 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 PRR20AP86496 221 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 TMEM252Q8N6L7 170 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 GPR82Q96P67 336 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 ARV1Q9H2C2 271 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 MGAT4CQ9UBM8 478 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 WDR83OSQ9Y284 106 aa10.51□□□□□ -0.73
PPP1CA-201ENST00000312989 IGKV3-20P01619 116 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 SAMD13Q5VXD3 122 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 ZNF546Q86UE3 836 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 C16orf92Q96LL3 132 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 MARVELD1Q9BSK0 173 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 ARL6Q9H0F7 186 aa10.5□□□□□ -0.73
PPP1CA-201ENST00000312989 H0YIZ8 118 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 SIX6O95475 246 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 OR5G3P0C626 314 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 CXCL3P19876 107 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 CAV2P51636 162 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 FXYD7P58549 80 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 RAP2BP61225 183 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 SPATA31B1PQ5VZV4 182 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 C1orf158Q8N1D5 194 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 RNF182Q8N6D2 247 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 NEU1Q99519 415 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 MFFQ9GZY8 342 aa10.49□□□□□ -0.73
PPP1CA-201ENST00000312989 DNAH2Q9P225 4427 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 L7N2F9 121 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 CRXO43186 299 aaPredicted RBP10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 SULT1A1P50225 295 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 NUTF2P61970 127 aaKnown RBP10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 VAMP2P63027 116 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 PXDC1Q5TGL8 231 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 Q6ZTC4 211 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 ENKURQ8TC29 256 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 RPRMQ9NS64 109 aa10.48□□□□□ -0.73
PPP1CA-201ENST00000312989 BCAP31P51572 246 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 CNN1P51911 297 aaKnown RBP10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 H2BFSP57053 126 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 S100A10P60903 97 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 PSG9Q00887 426 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 OPCMLQ14982 345 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 MIC13Q5XKP0 118 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 LINC00305Q7Z4B0 112 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 CHAC2Q8WUX2 184 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 UQCC1Q9NVA1 299 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 OR5AC2Q9NZP5 309 aa10.47□□□□□ -0.73
PPP1CA-201ENST00000312989 INMT-MINDY4F8WBC2 141 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 GOSR2O14653 212 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 IGLC2P0DOY2 106 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 CAMLGP49069 296 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 C12orf74Q32Q52 190 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 EBLN2Q6P2I7 272 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 OR4B1Q8NGF8 309 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 BATF3Q9NR55 127 aa10.46□□□□□ -0.74
PPP1CA-201ENST00000312989 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms