RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NGFRP08138 427 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 Q6ZT83 130 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
TRIM56-201ENST00000306085 PMS2P5A8MQ11 134 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 SHISA9B4DS77 424 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 SRSF8Q9BRL6 282 aaKnown RBP11.12□□□□□ -0.63
TRIM56-201ENST00000306085 SS18L2Q9UHA2 77 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 RLFQ13129 1914 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 EML5Q05BV3 1969 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 DEFB130BP0DP73 79 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 DEFB130AP0DP74 79 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 FOXD3Q9UJU5 478 aaPredicted RBP11.12□□□□□ -0.63
TRIM56-201ENST00000306085 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 TECTAO75443 2155 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 GAS1P54826 345 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 C1QL2Q7Z5L3 287 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 C15orf32Q32M92 178 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 A0A1W2PR77 199 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 PILRAQ9UKJ1 303 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 SBF1O95248 1867 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 GLRX5Q86SX6 157 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 TMEM219Q86XT9 240 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 C1orf194Q5T5A4 169 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 OBSL1O75147 1896 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 IGHG2P01859 326 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 NDPQ00604 133 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 PRSS57Q6UWY2 283 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 Q8TAT8 98 aa11.11□□□□□ -0.63
TRIM56-201ENST00000306085 CECR9P0C854 216 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 SPSB3Q6PJ21 355 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 FCN3O75636 299 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 UTF1Q5T230 341 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 LIMS2Q7Z4I7 341 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 DEFB105AQ8NG35 78 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 ZNF462Q96JM2 2506 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 UCP1P25874 307 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 NUP35Q8NFH5 326 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 C1QCP02747 245 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 LINC00527Q9UJ94 153 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 NHSQ6T4R5 1651 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 SH2D1AO60880 128 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 GAGE7O76087 117 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 GAGE12FP0CL80 117 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 GAGE12GP0CL81 117 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 GAGE12IP0CL82 117 aa11.1□□□□□ -0.63
TRIM56-201ENST00000306085 TMEM14DPA8MWL7 114 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 CXCL1P09341 107 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 ZNF138P52744 262 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 SP9P0CG40 484 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 KLF5Q13887 457 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-201ENST00000306085 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 C22orf46C9J442 243 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 CELA3BP08861 270 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 CFHR3Q02985 330 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 TAL2Q16559 108 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 SLC25A39Q9BZJ4 359 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-201ENST00000306085 C18orf12Q96KH6 178 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 STPG4Q8N801 248 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 LOC102723996A0A087X1L8 192 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 FAM231BA6NCW3 169 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 CCL3L1P16619 93 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 ZNF501Q96CX3 271 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-201ENST00000306085 UPK2O00526 184 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 KLRD1Q13241 179 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 EREGO14944 169 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 BMPERQ8N8U9 685 aa11.09□□□□□ -0.63
TRIM56-201ENST00000306085 A0A0G2JK05 382 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 IGHMP01871 453 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 ANKRD29Q8N6D5 301 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 C2orf16Q68DN1 1984 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 SLC25A28Q96A46 364 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 COX5BP10606 129 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 TTC28Q96AY4 2481 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 TRAV40A0A0B4J280 105 aa11.08□□□□□ -0.64
TRIM56-201ENST00000306085 TRBV5-3A0A0A0MS03 114 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 PIN1P1O15428 100 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 CDKN1AP38936 164 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 CRYBA4P53673 196 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 PAPPAQ13219 1627 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 METRNQ9UJH8 293 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 FGF6P10767 208 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 AZU1P20160 251 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 FAM27E3Q08E93 113 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 TMEM256Q8N2U0 113 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 GREM1O60565 184 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 IL18BPO95998 194 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 COX6A1P12074 109 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 TMEM243Q9BU79 118 aa11.07□□□□□ -0.64
TRIM56-201ENST00000306085 RPUSD1Q9UJJ7 312 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms