RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 EFNA2O43921 213 aa10.13□□□□□ -0.79
ABCA3-201ENST00000301732 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
ABCA3-201ENST00000301732 ZC2HC1AQ96GY0 325 aa10.13□□□□□ -0.79
ABCA3-201ENST00000301732 UBE2DNLQ8IWF7 75 aa10.13□□□□□ -0.79
ABCA3-201ENST00000301732 DLX4Q92988 240 aaPredicted RBP10.13□□□□□ -0.79
ABCA3-201ENST00000301732 KLK9Q9UKQ9 250 aa10.13□□□□□ -0.79
ABCA3-201ENST00000301732 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 CDK2AP2O75956 126 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 IGKV1-5P01602 117 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 SEC11AP67812 179 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 TMEM105Q8N8V8 129 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 PLSCR4Q9NRQ2 329 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 DOCK3Q8IZD9 2030 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 LGALS1P09382 135 aaKnown RBP10.12□□□□□ -0.79
ABCA3-201ENST00000301732 ID3Q02535 119 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 TMEM200BQ69YZ2 307 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 Q6AWC8 147 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 TM4SF5O14894 197 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 ARMS2P0C7Q2 107 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 MSRB2Q9Y3D2 182 aa10.12□□□□□ -0.79
ABCA3-201ENST00000301732 SPTAN1Q13813 2472 aaKnown RBP10.11□□□□□ -0.79
ABCA3-201ENST00000301732 CFHR1Q03591 330 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 CDPF1Q6NVV7 123 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 HS3ST6Q96QI5 342 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 IGHV1-46P01743 117 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 Q71RC1 249 aaPredicted RBP10.11□□□□□ -0.79
ABCA3-201ENST00000301732 PRIMA1Q86XR5 153 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 C3orf56Q8N813 242 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 YPEL1O60688 119 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 AMTNQ6UX39 209 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 MRPL52Q86TS9 123 aaKnown RBP10.11□□□□□ -0.79
ABCA3-201ENST00000301732 DOCK4Q8N1I0 1966 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 CD177Q8N6Q3 437 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 YPEL2Q96QA6 119 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 NEUROG3Q9Y4Z2 214 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 C20orf204Q6ZNR8 217 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 PEMTQ9UBM1 199 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 WNT2P09544 360 aa10.11□□□□□ -0.79
ABCA3-201ENST00000301732 SRCAPQ6ZRS2 3230 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 IGLV3-21P80748 117 aaPredicted RBP10.1□□□□□ -0.79
ABCA3-201ENST00000301732 SNHG12Q9BXW3 62 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
ABCA3-201ENST00000301732 LINC00114Q6XXX2 140 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 WDR83OSQ9Y284 106 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 RGPD3A6NKT7 1758 aaPredicted RBP10.1□□□□□ -0.79
ABCA3-201ENST00000301732 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 WNK2Q9Y3S1 2297 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 A0A1W2PR77 199 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 PSCAO43653 123 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 HAMPP81172 84 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 ANAPC10Q9UM13 185 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 IGHV2-26A0A0B4J1V2 119 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 MPZP25189 248 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
ABCA3-201ENST00000301732 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
ABCA3-201ENST00000301732 LYPD2Q6UXB3 125 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 PLCE1Q9P212 2302 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 IGHV4-4A0A075B6R2 117 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 CLPSL1A2RUU4 121 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 IGKV1-16P04430 117 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 TRBV20-1A0A075B6N2 111 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 Q6ZRM9 215 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 QSER1Q2KHR3 1735 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-201ENST00000301732 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-201ENST00000301732 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
ABCA3-201ENST00000301732 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 SLC25A16P16260 332 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 CSRP3P50461 194 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 PVRIGQ6DKI7 326 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 TRAV41A0A0B4J266 112 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 RUSC1-AS1Q66K80 236 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 SLC50A1Q9BRV3 221 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 PSME4Q14997 1843 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 LYPD3O95274 346 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 NEU4Q8WWR8 484 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-201ENST00000301732 TIMM21Q9BVV7 248 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 F2Z2F3 143 aa10.08□□□□□ -0.8
ABCA3-201ENST00000301732 LOC102723996A0A087X1L8 192 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 TRBV24-1A0A075B6N3 115 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 H3BUX3 64 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 GAGE4Q13068 117 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 GAGE5Q13069 117 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 C5orf47Q569G3 176 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 XCL2Q9UBD3 114 aa10.07□□□□□ -0.8
ABCA3-201ENST00000301732 J3QRE1 110 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms