RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 M0QZ24 198 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 CHEK1O14757 476 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 GGCTO75223 188 aaKnown RBP7.38□□□□□ -1.23
PRDM9-201ENST00000296682 NDUFB8O95169 186 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 TYMSP04818 313 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 CD99P14209 185 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 MFAP4P55083 255 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 RNF125Q96EQ8 232 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 CLEC5AQ9NY25 188 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 ANKRD17O75179 2603 aaKnown RBP7.38□□□□□ -1.23
PRDM9-201ENST00000296682 LINC01548A6NM66 108 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 CLEC3BP05452 202 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 EFNA4P52798 201 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 TCTAP57738 103 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 ZNF329Q86UD4 541 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 BEND2Q8NDZ0 799 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 TNFRSF14Q92956 283 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 FXYD5Q96DB9 178 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 CCL19Q99731 98 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 C19orf24Q9BVV8 132 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 THYN1Q9P016 225 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 C2CD3Q4AC94 2353 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 HSBP1O75506 76 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 APCSP02743 223 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 PDLIM4P50479 330 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 NDPQ00604 133 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 AAMDCQ9H7C9 122 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 FASNP49327 2511 aaKnown RBP7.37□□□□□ -1.23
PRDM9-201ENST00000296682 TEX22C9J3V5 150 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 IGLC1P0CG04 106 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 Q71RC1 249 aaPredicted RBP7.37□□□□□ -1.23
PRDM9-201ENST00000296682 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 C8orf46Q8TAG6 207 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 ITLN2Q8WWU7 325 aaPredicted RBP7.37□□□□□ -1.23
PRDM9-201ENST00000296682 TBX15Q96SF7 602 aa7.37□□□□□ -1.23
PRDM9-201ENST00000296682 PRRC2AP48634 2157 aaKnown RBP7.36□□□□□ -1.23
PRDM9-201ENST00000296682 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 CSN1S1P47710 185 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 C7orf69Q9H7B7 122 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 V9GYV3 84 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 IGKV1-17P01599 117 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 FOXL1Q12952 345 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 PMCHL1Q16048 86 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 C15orf32Q32M92 178 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 ACTL10Q5JWF8 245 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 Q8TAT8 98 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 DUX5Q96PT3 197 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 C1RLQ9NZP8 487 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 SFTPCP11686 197 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 HLA-DMBP28068 263 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 PPIFP30405 207 aaKnown RBP7.36□□□□□ -1.23
PRDM9-201ENST00000296682 RHOGP84095 191 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 CLEC2AQ6UVW9 174 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 DMRT1Q9Y5R6 373 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 LY96Q9Y6Y9 160 aa7.36□□□□□ -1.23
PRDM9-201ENST00000296682 K7EQM0 130 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 HIST1H1EP10412 219 aaKnown RBP7.35□□□□□ -1.23
PRDM9-201ENST00000296682 ZNF138P52744 262 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 ZNF586Q9NXT0 402 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 IGKV2-40A0A087WW87 121 aaPredicted RBP7.35□□□□□ -1.23
PRDM9-201ENST00000296682 IGKV2D-40P01614 121 aaPredicted RBP7.35□□□□□ -1.23
PRDM9-201ENST00000296682 PF4V1P10720 104 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 TPPP2P59282 170 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 WFDC3Q8IUB2 231 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 C11orf52Q96A22 123 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 GPR82Q96P67 336 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 TRGV9Q99603 122 aa7.35□□□□□ -1.23
PRDM9-201ENST00000296682 LOC389332A0A1B0GUA5 103 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 MRGPRG-AS1Q2M3A8 158 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 FBXL19-AS1Q494R0 122 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 C5orf17Q8NAS9 161 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 PSMB11A5LHX3 300 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 K7EIM0 57 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 ATP6V0E1O15342 81 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 HLA-DRB1P01911 266 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 ORM1P02763 201 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 TCRAP04437 139 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 SRD5A1P18405 259 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 TMEM116Q8NCL8 245 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 NUP35Q8NFH5 326 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 CHRDL1Q9BU40 450 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 C9JCJ5 164 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
PRDM9-201ENST00000296682 GBGT1Q8N5D6 347 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 MCRIP2Q9BUT9 160 aaKnown RBP7.34□□□□□ -1.23
PRDM9-201ENST00000296682 CDC42EP3Q9UKI2 254 aa7.34□□□□□ -1.23
PRDM9-201ENST00000296682 ZANQ9Y493 2812 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 IGHV4-61A0A0C4DH41 118 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 WFDC12Q8WWY7 111 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 NPIPB5A8MRT5 1133 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 I3L2K1 104 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 IGHV4-39P01824 125 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
PRDM9-201ENST00000296682 TFPI2P48307 235 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 ZNF562Q6V9R5 426 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
PRDM9-201ENST00000296682 ARL6IP6Q8N6S5 226 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 ATG101Q9BSB4 218 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms