RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 OR11H6Q8NGC7 330 aa12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 GNG7O60262 68 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 PRTN3P24158 256 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 C5orf64Q2M2E5 130 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 PGLYRP4Q96LB8 373 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 VWC2LB2RUY7 222 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 P01737 135 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 UQCRFS1P47985 274 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 Q0VG73 95 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 Q56UQ5 140 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 NEU4Q8WWR8 484 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 MBD6Q96DN6 1003 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 VAMP8Q9BV40 100 aa12.48□□□□□ -0.41
NCKIPSD-201ENST00000294129 TEX43Q6ZNM6 134 aa12.47□□□□□ -0.41
NCKIPSD-201ENST00000294129 MIEN1Q9BRT3 115 aa12.47□□□□□ -0.41
NCKIPSD-201ENST00000294129 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
NCKIPSD-201ENST00000294129 TSKUQ8WUA8 353 aa12.47□□□□□ -0.41
NCKIPSD-201ENST00000294129 C7orf69Q9H7B7 122 aa12.47□□□□□ -0.41
NCKIPSD-201ENST00000294129 A0A1W2PS18 150 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 M0R3E3 92 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 OR2J3O76001 311 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 FAM231DQ6ZW35 169 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 RNF125Q96EQ8 232 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 RNF5Q99942 180 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 TMEM208Q9BTX3 173 aa12.46□□□□□ -0.41
NCKIPSD-201ENST00000294129 RPLP1P05386 114 aaKnown RBP12.46□□□□□ -0.42
NCKIPSD-201ENST00000294129 PLP1P60201 277 aa12.46□□□□□ -0.42
NCKIPSD-201ENST00000294129 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.422e-7■■■□□ 18.1
NCKIPSD-201ENST00000294129 RPP21Q9H633 154 aaKnown RBP12.46□□□□□ -0.42
NCKIPSD-201ENST00000294129 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 M0R1W7 72 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 TOMM40O96008 361 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 GPX1P07203 203 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 COL8A1P27658 744 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 FOXA3P55318 350 aaPredicted RBP12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 OR4F17Q8NGA8 305 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 FMC1Q96HJ9 113 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 C20orf144Q9BQM9 153 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 OR2T8A6NH00 312 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 ODF3BA8MYP8 253 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 BPIFA4PQ86YQ2 179 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 TMEM11P17152 192 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 KCNS1Q96KK3 526 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
NCKIPSD-201ENST00000294129 M0QZ24 198 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 LTAP01374 205 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 NPSP0C0P6 89 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 ESDP10768 282 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 FAM120AOSQ5T036 256 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 RNASEKQ6P5S7 137 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 Q86TA4 180 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 C18orf32Q8TCD1 76 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 OTORQ9NRC9 128 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 HLA-DRB1P01911 266 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 HOXB4P17483 251 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 FANCD2OSQ96PS1 177 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 SHANK2-AS3Q9BTD1 123 aa12.44□□□□□ -0.42
NCKIPSD-201ENST00000294129 M0QZK8 103 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 NDUFA3O95167 84 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 COX19Q49B96 90 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 NPBQ8NG41 125 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 NDUFB8O95169 186 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 TFPI2P48307 235 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 ECSCRQ19T08 205 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 CHRDL1Q9BU40 450 aa12.43□□□□□ -0.42
NCKIPSD-201ENST00000294129 DIRC3C9JPN6 131 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 DLEU1O43261 78 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 ZNF324O75467 553 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 ATOH7Q8N100 152 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 BPESC1Q9GZL8 116 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 GOLT1BQ9Y3E0 138 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 TRBV19A0A075B6N1 114 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 A8MWL6 223 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 C19orf84I3L1E1 186 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 IGFL4Q6B9Z1 124 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 CCDC144NLQ6NUI1 221 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 FLNCQ14315 2725 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 H3BRN7 92 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 HSBP1O75506 76 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 MFAP4P55083 255 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 PMCHL1Q16048 86 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 ZNF562Q6V9R5 426 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 C21orf62Q9NYP8 219 aa12.42□□□□□ -0.42
NCKIPSD-201ENST00000294129 CFAP46Q8IYW2 2715 aa12.41□□□□□ -0.42
NCKIPSD-201ENST00000294129 GNLYP22749 145 aa12.41□□□□□ -0.42
NCKIPSD-201ENST00000294129 DTX2Q86UW9 622 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms