RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 OR5B12Q96R08 314 aa12.96□□□□□ -0.33
HIF3A-203ENST00000291300 TXN2Q99757 166 aa12.96□□□□□ -0.33
HIF3A-203ENST00000291300 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
HIF3A-203ENST00000291300 PPP5D1E7EU14 171 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 J3QLI3 93 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 FSHBP01225 129 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 IGF1P05019 195 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 SNRPEP62304 92 aaKnown RBP12.95□□□□□ -0.34
HIF3A-203ENST00000291300 TOMM20LQ6UXN7 152 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 WFDC11Q8NEX6 87 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 GNB4Q9HAV0 340 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 CDC42EP3Q9UKI2 254 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 PHOX2AO14813 284 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 PPIFP30405 207 aaKnown RBP12.95□□□□□ -0.34
HIF3A-203ENST00000291300 SMUG1Q53HV7 270 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 ZFAND3Q9H8U3 227 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 TLN2Q9Y4G6 2542 aa12.95□□□□□ -0.34
HIF3A-203ENST00000291300 TRBV19A0A075B6N1 114 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 TRGV3P03979 118 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 MGST1P10620 155 aaKnown RBP12.94□□□□□ -0.34
HIF3A-203ENST00000291300 CNN1P51911 297 aaKnown RBP12.94□□□□□ -0.34
HIF3A-203ENST00000291300 BPIFA4PQ86YQ2 179 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 V9GYV3 84 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 ITPR2Q14571 2701 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 GGCTO75223 188 aaKnown RBP12.94□□□□□ -0.34
HIF3A-203ENST00000291300 GCGP01275 180 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 TRBV12-3P01733 135 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 ASCL2Q99929 193 aa12.94□□□□□ -0.34
HIF3A-203ENST00000291300 TRAV8-1A0A0A6YYK1 113 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 CLPSL1A2RUU4 121 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 TCRAP04437 139 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 S100PP25815 95 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 IER3P46695 156 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 ERVFC1-1P60608 527 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 SIGLEC15Q6ZMC9 328 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 FRZBQ92765 325 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 EEF1AKMT3Q96AZ1 226 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
HIF3A-203ENST00000291300 TGOLN2O43493 480 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
HIF3A-203ENST00000291300 TAS2R60P59551 318 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 MBD6Q96DN6 1003 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 OTORQ9NRC9 128 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 IGHV3OR16-13A0A075B7E8 117 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 IGHV3-74A0A0B4J1X5 117 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 ZNF207O43670 478 aaKnown RBP12.92□□□□□ -0.34
HIF3A-203ENST00000291300 APOHP02749 345 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-203ENST00000291300 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 TMEM183BQ1AE95 376 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 BAGE2Q86Y30 109 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 OR4F17Q8NGA8 305 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 ATG101Q9BSB4 218 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 BIN3Q9NQY0 253 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 KLF12Q9Y4X4 402 aa12.92□□□□□ -0.34
HIF3A-203ENST00000291300 GCN1Q92616 2671 aaKnown RBP12.91□□□□□ -0.34
HIF3A-203ENST00000291300 C5orf52A6NGY3 159 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 M0R3E3 92 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BKO60814 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BJP06899 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BOP23527 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BBP33778 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BDP58876 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 TPPP2P59282 170 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-203ENST00000291300 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 RABAC1Q9UI14 185 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 CA1P00915 261 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-203ENST00000291300 IGHV3-11P01762 117 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 SRD5A3Q9H8P0 318 aa12.91□□□□□ -0.34
HIF3A-203ENST00000291300 TRBV7-1A0A0A6YYK4 115 aa12.9□□□□□ -0.34
HIF3A-203ENST00000291300 M0QZK8 103 aa12.9□□□□□ -0.34
HIF3A-203ENST00000291300 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
HIF3A-203ENST00000291300 FOXL1Q12952 345 aa12.9□□□□□ -0.34
HIF3A-203ENST00000291300 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
HIF3A-203ENST00000291300 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
HIF3A-203ENST00000291300 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
HIF3A-203ENST00000291300 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 SMAD7O15105 426 aaKnown RBP12.89□□□□□ -0.35
HIF3A-203ENST00000291300 TRGC1P0CF51 173 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 IL36BQ9NZH7 164 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 AKAP9Q99996 3911 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 UBE2G1P62253 170 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 CFHR3Q02985 330 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 PRR27Q6MZM9 219 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms