RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 PHOX2AO14813 284 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 OR7C2O60412 319 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 BCL2P10415 239 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 NPPCP23582 126 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 DPPA3Q6W0C5 159 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 LINC00305Q7Z4B0 112 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 SRSF8Q9BRL6 282 aaKnown RBP9.09□□□□□ -0.95
SSRP1-201ENST00000278412 DERL1Q9BUN8 251 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 COX7A2P2O60397 106 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 TRGV3P03979 118 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.96
SSRP1-201ENST00000278412 NPSP0C0P6 89 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 PF4V1P10720 104 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 C9orf139Q6ZV77 190 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 TRGV9Q99603 122 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 FUT9Q9Y231 359 aa9.09□□□□□ -0.96
SSRP1-201ENST00000278412 CORTO00230 105 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 CD5LO43866 347 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 IL4P05112 153 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 EDN2P20800 178 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 TPPP2P59282 170 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 ETFRF1Q6IPR1 90 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 OR5AU1Q8NGC0 362 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 ZNF702PQ9H963 129 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 AURKAIP1Q9NWT8 199 aaPredicted RBP9.08□□□□□ -0.96
SSRP1-201ENST00000278412 M0R143 59 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 GZMBP10144 247 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 GCHFRP30047 84 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 C10orf113Q5VZT2 155 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 ZNF502Q8TBZ5 544 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 GNB4Q9HAV0 340 aa9.08□□□□□ -0.96
SSRP1-201ENST00000278412 FAM181BA6NEQ2 426 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 DNAJC9-AS1A6NH13 148 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 IGF1P05019 195 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 RHOBP62745 196 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 PDZD11Q5EBL8 140 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 ZNF506Q5JVG8 444 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 C18orf65Q6ZTR6 163 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 ZNF491Q8N8L2 437 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 C17orf77Q96MU5 243 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 HIST1H2BLQ99880 126 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 PITPNC1Q9UKF7 332 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 PUS1Q9Y606 427 aaKnown RBP eCLIP9.07□□□□□ -0.96
SSRP1-201ENST00000278412 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 MFAP4P55083 255 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 C16orf82Q7Z2V1 217 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 OR4F5Q8NH21 305 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 OR4F4Q96R69 305 aa9.07□□□□□ -0.96
SSRP1-201ENST00000278412 NOTCH3Q9UM47 2321 aa9.06□□□□□ -0.96
SSRP1-201ENST00000278412 HBE1P02100 147 aa9.06□□□□□ -0.96
SSRP1-201ENST00000278412 BLNKQ8WV28 456 aa9.06□□□□□ -0.96
SSRP1-201ENST00000278412 APOHP02749 345 aaPredicted RBP9.06□□□□□ -0.96
SSRP1-201ENST00000278412 RPL15P61313 204 aaKnown RBP9.06□□□□□ -0.96
SSRP1-201ENST00000278412 ELOBQ15370 118 aa9.06□□□□□ -0.96
SSRP1-201ENST00000278412 C11orf44Q8N8P7 122 aa9.06□□□□□ -0.96
SSRP1-201ENST00000278412 RPUSD4Q96CM3 377 aaKnown RBP9.06□□□□□ -0.96
SSRP1-201ENST00000278412 A0A087WWC5 75 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 CXCL1P09341 107 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 CFHR3Q02985 330 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 Q8WTZ3 238 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 SLC35B3Q9H1N7 401 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 GGTLC3B5MD39 225 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 INAFM1C9JVW0 142 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 C11orf94C9JXX5 98 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 HYPMO75409 117 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 RPLP1P05386 114 aaKnown RBP9.05□□□□□ -0.96
SSRP1-201ENST00000278412 MEF2BQ02080 365 aaPredicted RBP9.05□□□□□ -0.96
SSRP1-201ENST00000278412 UNQ9165/PRO28630Q6UXU0 137 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
SSRP1-201ENST00000278412 NECAP1Q8NC96 275 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 SGK494Q96LW2 274 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 ASCL2Q99929 193 aa9.05□□□□□ -0.96
SSRP1-201ENST00000278412 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 H3BQ15 152 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 M0QZK8 103 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 GGCTO75223 188 aaKnown RBP9.04□□□□□ -0.96
SSRP1-201ENST00000278412 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
SSRP1-201ENST00000278412 SLC25A39Q9BZJ4 359 aaPredicted RBP9.04□□□□□ -0.96
SSRP1-201ENST00000278412 CXorf1O96002 111 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 TRGC1P0CF51 173 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 UBE2L3P68036 154 aaKnown RBP9.04□□□□□ -0.96
SSRP1-201ENST00000278412 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 FXYD5Q96DB9 178 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 LINC00479Q96M42 142 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 KCNIP2Q9NS61 270 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 TRGC2P03986 189 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 HNF1AP20823 631 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 CRIP2P52943 208 aaPredicted RBP9.04□□□□□ -0.96
SSRP1-201ENST00000278412 ATP5G2Q06055 141 aa9.04□□□□□ -0.96
SSRP1-201ENST00000278412 TOMM20LQ6UXN7 152 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms