RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZNF474Q6S9Z5 364 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-202ENST00000273342 ZNF788Q6ZQV5 615 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 FA2HQ7L5A8 372 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 OR4C13Q8NGP0 309 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 CCL17Q92583 94 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 CD5LO43866 347 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 LTAP01374 205 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 RBP4P02753 201 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 PRO3102Q9H379 93 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 THYN1Q9P016 225 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 HSPB8Q9UJY1 196 aa10.32□□□□□ -0.76
COL8A1-202ENST00000273342 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
COL8A1-202ENST00000273342 PPBPP02775 128 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 IGFBPL1Q8WX77 278 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 PEF1Q9UBV8 284 aaKnown RBP10.31□□□□□ -0.76
COL8A1-202ENST00000273342 LRBAP50851 2863 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 K7ERU9 68 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 TNFRSF1AP19438 455 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 GLRXP35754 106 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 TMEM97Q5BJF2 176 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 SEM1Q6ZVN7 128 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 C1orf162Q8NEQ5 155 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-202ENST00000273342 RABAC1Q9UI14 185 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 FAM162BQ5T6X4 162 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 LYPD2Q6UXB3 125 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 FMC1Q96HJ9 113 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 CSTL1Q9H114 145 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 KLF12Q9Y4X4 402 aa10.31□□□□□ -0.76
COL8A1-202ENST00000273342 M0R3E3 92 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 FCN3O75636 299 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 GP9P14770 177 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 NMUP48645 174 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 Q86TA4 180 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 OR5AN1Q8NGI8 311 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 JMJD8Q96S16 334 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 ZNF747Q9BV97 191 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
COL8A1-202ENST00000273342 SMKR1H3BMG3 65 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 K7EMI3 77 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 GOSR1O95249 250 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 IGHG3P01860 377 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 CACNG7P62955 275 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 TMEM167AQ8TBQ9 72 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 ATRXP46100 2492 aa10.3□□□□□ -0.76
COL8A1-202ENST00000273342 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 TMEM213A2RRL7 107 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 M0R296 226 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 COX8AP10176 69 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 FAM222BQ8WU58 562 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
COL8A1-202ENST00000273342 IGLC1P0CG04 106 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 C18orf15Q96N68 181 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
COL8A1-202ENST00000273342 IGLV2-23P01705 113 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 LINC01545Q5VT33 79 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 LINC00312Q9Y6C7 94 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 D6R8Y8 96 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 FAM71F2Q6NXP2 309 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 HIGD1AQ9Y241 93 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 ZNF785A8K8V0 405 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 CSN1S1P47710 185 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 ATP5IP56385 69 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-202ENST00000273342 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 VSTM2AQ8TAG5 236 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 C8orf49Q96NF6 230 aa10.28□□□□□ -0.76
COL8A1-202ENST00000273342 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.77
COL8A1-202ENST00000273342 RALYQ9UKM9 306 aaKnown RBP10.27□□□□□ -0.77
COL8A1-202ENST00000273342 TMEM265A0A087WTH1 108 aa10.27□□□□□ -0.77
COL8A1-202ENST00000273342 KIR3DS1Q14943 382 aa10.27□□□□□ -0.77
COL8A1-202ENST00000273342 MS4A6AQ9H2W1 248 aa10.27□□□□□ -0.77
COL8A1-202ENST00000273342 MAP1AP78559 2803 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-202ENST00000273342 IGLV2-11P01706 119 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 RPL27AP46776 148 aaKnown RBP10.26□□□□□ -0.77
COL8A1-202ENST00000273342 BCL6BQ8N143 479 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-202ENST00000273342 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 SLC25A39Q9BZJ4 359 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-202ENST00000273342 COL27A1Q8IZC6 1860 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-202ENST00000273342 HAX1O00165 279 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 TM4SF5O14894 197 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 ZNF207O43670 478 aaKnown RBP10.26□□□□□ -0.77
COL8A1-202ENST00000273342 C8orf46Q8TAG6 207 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 TMEM133Q9H2Q1 129 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 C1RLQ9NZP8 487 aa10.26□□□□□ -0.77
COL8A1-202ENST00000273342 IGLV3-9A0A075B6K5 115 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 FBXL15Q9H469 300 aa10.25□□□□□ -0.77
COL8A1-202ENST00000273342 ZNF492Q9P255 531 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms