RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 A0A087X0K7 114 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 GP9P14770 177 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 HTR1DP28221 377 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 MYCNOSP40205 109 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 FAM120AOSQ5T036 256 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 NAA38Q9BRA0 125 aaKnown RBP13.36□□□□□ -0.27
SQLE-201ENST00000265896 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 Q6ZS92 163 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 LINC01560Q8TB33 94 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 RNASE6Q93091 150 aaKnown RBP13.36□□□□□ -0.27
SQLE-201ENST00000265896 TMEM186Q96B77 213 aa13.36□□□□□ -0.27
SQLE-201ENST00000265896 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
SQLE-201ENST00000265896 A0A1B0GXF2 115 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 A8MWL6 223 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 GRNP28799 593 aaKnown RBP13.35□□□□□ -0.27
SQLE-201ENST00000265896 C22orf15Q8WYQ4 148 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 HIGD1AQ9Y241 93 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 SIGLEC9Q9Y336 463 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 E7EQL1 145 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 LINC00614P0C842 121 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 LDLRAD2Q5SZI1 272 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 FAM231DQ6ZW35 169 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 MLST8Q9BVC4 326 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 SLC25A39Q9BZJ4 359 aaPredicted RBP13.35□□□□□ -0.27
SQLE-201ENST00000265896 TMEM133Q9H2Q1 129 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 ONECUT1Q9UBC0 465 aa13.35□□□□□ -0.27
SQLE-201ENST00000265896 SYS1-DBNDD2H3BUS1 97 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
SQLE-201ENST00000265896 GFRALQ6UXV0 394 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 C5orf17Q8NAS9 161 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 FAM57AQ8TBR7 257 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 C8orf49Q96NF6 230 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 IGHV2-26A0A0B4J1V2 119 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 PRRG2O14669 202 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 NCR2O95944 276 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 CEACAM8P31997 349 aaPredicted RBP13.34□□□□□ -0.27
SQLE-201ENST00000265896 MEF2CQ06413 473 aaPredicted RBP13.34□□□□□ -0.27
SQLE-201ENST00000265896 GAGE1Q13065 139 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 PPP1R27Q86WC6 154 aa13.34□□□□□ -0.27
SQLE-201ENST00000265896 FCGR2BP31994 310 aaPredicted RBP13.33□□□□□ -0.28
SQLE-201ENST00000265896 KLRD1Q13241 179 aa13.33□□□□□ -0.28
SQLE-201ENST00000265896 HES1Q14469 280 aa13.33□□□□□ -0.28
SQLE-201ENST00000265896 COX19Q49B96 90 aa13.33□□□□□ -0.28
SQLE-201ENST00000265896 RASL11BQ9BPW5 248 aa13.33□□□□□ -0.28
SQLE-201ENST00000265896 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
SQLE-201ENST00000265896 ZNF785A8K8V0 405 aa13.33□□□□□ -0.28
SQLE-201ENST00000265896 IGHV1-3A0A0C4DH29 117 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 UQCRFS1P47985 274 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 ARF6P62330 175 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 TMEM155Q4W5P6 130 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 Q86TA4 180 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 OR8A1Q8NGG7 326 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 WIPF2Q8TF74 440 aaPredicted RBP13.32□□□□□ -0.28
SQLE-201ENST00000265896 RPEQ96AT9 228 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 SMKR1H3BMG3 65 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 LTAP01374 205 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 IL4P05112 153 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 RBPMS2Q6ZRY4 209 aaKnown RBP13.32□□□□□ -0.28
SQLE-201ENST00000265896 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 IGHV1-69-2A0A0G2JMI3 117 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 TOMM40O96008 361 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 APOHP02749 345 aaPredicted RBP13.32□□□□□ -0.28
SQLE-201ENST00000265896 C8orf46Q8TAG6 207 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 COX11Q9Y6N1 276 aa13.32□□□□□ -0.28
SQLE-201ENST00000265896 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 TMEM213A2RRL7 107 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 IGLC1P0CG04 106 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 Q8TAT8 98 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 TEX22C9J3V5 150 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 CEACAM4O75871 244 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 OR2J3O76001 311 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 DLX6P56179 175 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 KLF5Q13887 457 aaPredicted RBP13.31□□□□□ -0.28
SQLE-201ENST00000265896 MUC15Q8N387 334 aa13.31□□□□□ -0.28
SQLE-201ENST00000265896 C19orf71A6NCJ1 209 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 IGKV1-17P01599 117 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 ZNF738Q8NE65 137 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 OR4C5Q8NGB2 326 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 TIMM23O14925 209 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 IGLV2-11P01706 119 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 TMEM75Q8N9X5 138 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 NUP37Q8NFH4 326 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 PRSS22Q9GZN4 317 aa13.3□□□□□ -0.28
SQLE-201ENST00000265896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
SQLE-201ENST00000265896 HLA-DMBP28068 263 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 LOC105371242A0A075B767 164 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 FAM90A27PA6NNH2 459 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 CRIP1P50238 77 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 FMC1Q96HJ9 113 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
SQLE-201ENST00000265896 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
SQLE-201ENST00000265896 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
SQLE-201ENST00000265896 SFTPCP11686 197 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 MC5RP33032 325 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 IFI27P40305 119 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms