RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 GALR1P47211 349 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 DEFB135Q30KP9 77 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 PXDC1Q5TGL8 231 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 STHQ8IWL8 128 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 OR11H7Q8NGC8 314 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 OR5C1Q8NGR4 320 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 TMEM37Q8WXS4 190 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 GPR82Q96P67 336 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 TP53TG1Q9Y2A0 90 aa6.18□□□□□ -1.42
ERCC8-201ENST00000265038 MRPS12O15235 138 aaKnown RBP6.17□□□□□ -1.42
ERCC8-201ENST00000265038 FGF7P21781 194 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 RPL29P47914 159 aaKnown RBP6.17□□□□□ -1.42
ERCC8-201ENST00000265038 DEFB1P60022 68 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 BAXQ07812 192 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 RAB31Q13636 194 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 OPCMLQ14982 345 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 OXA1LQ15070 435 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 RGS21Q2M5E4 152 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 C20orf173Q96LM9 149 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 LINC00052Q96N35 136 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 MBD2Q9UBB5 411 aa6.17□□□□□ -1.42
ERCC8-201ENST00000265038 H3BMM0 161 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 ISLRO14498 428 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 CA1P00915 261 aaPredicted RBP6.16□□□□□ -1.42
ERCC8-201ENST00000265038 LYL1P12980 280 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 ID1P41134 155 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 PSMB3P49720 205 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 CLINT1Q14677 625 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 GDF5OSQ5U4N7 250 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 MORN5Q5VZ52 161 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 LINC00305Q7Z4B0 112 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 MUC7Q8TAX7 377 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 THAP6Q8TBB0 222 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 MED28Q9H204 178 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 DNAJC4Q9NNZ3 241 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 SLC39A9Q9NUM3 307 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 ELOA3CA0A087WX78 387 aaPredicted RBP6.16□□□□□ -1.42
ERCC8-201ENST00000265038 TRAV8-2A0A0B4J237 113 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 COX7A2P2O60397 106 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 PET100P0DJ07 73 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 RPL7P18124 248 aaKnown RBP6.16□□□□□ -1.42
ERCC8-201ENST00000265038 RPL12P30050 165 aaKnown RBP6.16□□□□□ -1.42
ERCC8-201ENST00000265038 MEOX2P50222 304 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 B2MP61769 119 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 C10orf113Q5VZT2 155 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 Q6ZRG5 221 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 S100A7AQ86SG5 101 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 HSPB11Q9Y547 144 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 COL7A1Q02388 2944 aa6.16□□□□□ -1.42
ERCC8-201ENST00000265038 A0A087X0K7 114 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 TRAV5A0A0B4J249 113 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 MPDU1O75352 247 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 HLA-DRB4P13762 266 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 C4BPBP20851 252 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 Q5BKY6 102 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 SAMD13Q5VXD3 122 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 MORN3Q6PF18 240 aaPredicted RBP6.15□□□□□ -1.42
ERCC8-201ENST00000265038 FOXI2Q6ZQN5 318 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 GATAD1Q8WUU5 269 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 NPCDR1Q9BY65 106 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 WDR61Q9GZS3 305 aaKnown RBP6.15□□□□□ -1.42
ERCC8-201ENST00000265038 SAV1Q9H4B6 383 aaPredicted RBP6.15□□□□□ -1.42
ERCC8-201ENST00000265038 PXMP4Q9Y6I8 212 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 HLA-DRB4X5D2U9 266 aa6.15□□□□□ -1.42
ERCC8-201ENST00000265038 F6UB75 175 aa6.15□□□□□ -1.43
ERCC8-201ENST00000265038 SPP1P10451 314 aa6.15□□□□□ -1.43
ERCC8-201ENST00000265038 ATF4P18848 351 aaPredicted RBP6.15□□□□□ -1.43
ERCC8-201ENST00000265038 FGL1Q08830 312 aa6.15□□□□□ -1.43
ERCC8-201ENST00000265038 OR1L4Q8NGR5 311 aa6.15□□□□□ -1.43
ERCC8-201ENST00000265038 ATP5SQ99766 215 aa6.15□□□□□ -1.43
ERCC8-201ENST00000265038 WFDC1Q9HC57 220 aa6.15□□□□□ -1.43
ERCC8-201ENST00000265038 A0A0J9YWU9 116 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 SNRPCP09234 159 aaKnown RBP6.14□□□□□ -1.43
ERCC8-201ENST00000265038 HLA-DMBP28068 263 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 GCSAMLQ5JQS6 135 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 CASC10Q5T4H9 136 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 RNF182Q8N6D2 247 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 CSNK1G2-AS1Q8NCQ2 148 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 RARRES2Q99969 163 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 SMIM3Q9BZL3 60 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 CLEC5AQ9NY25 188 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
ERCC8-201ENST00000265038 A0A0J9YX75 114 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 IGKV3-20P01619 116 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 GIPP09681 153 aaPredicted RBP6.13□□□□□ -1.43
ERCC8-201ENST00000265038 IGLC2P0DOY2 106 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 FAM78BQ5VT40 261 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 ZFAND6Q6FIF0 208 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 BPIFA4PQ86YQ2 179 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 OR11H2Q8NH07 326 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 PFDN5Q99471 154 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 RPRMQ9NS64 109 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 H3BQ15 152 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 H3BTX0 84 aa6.13□□□□□ -1.43
ERCC8-201ENST00000265038 TMEM41BQ5BJD5 291 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms