RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RNF2Q99496 336 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 TECRQ9NZ01 308 aaKnown RBP7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 U3KQE9 123 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 VWFP04275 2813 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 IGHV7-4-1A0A0J9YVY3 117 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 BUB3O43684 328 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 OR7C2O60412 319 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 REC114Q7Z4M0 266 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 LRRC20Q8TCA0 184 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 TMEM158Q8WZ71 300 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 DAZ1Q9NQZ3 744 aaKnown RBP7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 SMAD5-AS1Q9Y6J3 95 aa7.4□□□□□ -1.22
SNRNP40-201ENST00000263694 C2orf70A6NJV1 201 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 H3BQ15 152 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 K7EMT4 169 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 LGALS9O00182 355 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 PRB4P10163 310 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 GP9P14770 177 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 GCHFRP30047 84 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 C12orf54Q6X4T0 127 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 IL34Q6ZMJ4 242 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 OR8I2Q8N0Y5 310 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 C3orf56Q8N813 242 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 LYPD6BQ8NI32 183 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 C17orf77Q96MU5 243 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 MDFIQ99750 246 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 PAXXQ9BUH6 204 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 OR51M1Q9H341 326 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 SMPXQ9UHP9 88 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 UFC1Q9Y3C8 167 aa7.39□□□□□ -1.23
SNRNP40-201ENST00000263694 TRAV1-1A0A0B4J248 108 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 A8MWP6 167 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 CHEK1O14757 476 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 MRPS12O15235 138 aaKnown RBP7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 CXorf1O96002 111 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 FOLR2P14207 255 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 CBLN1P23435 193 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 MYCNOSP40205 109 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 TAS2R45P59539 299 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 UBE2G2P60604 165 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 KHDC3LQ587J8 217 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 XP32Q5T750 250 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 C16orf54Q6UWD8 224 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 OR9G4Q8NGQ1 327 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 BLNKQ8WV28 456 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 FXYD5Q96DB9 178 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 ZNF747Q9BV97 191 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 ELOVL1Q9BW60 279 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 SORL1Q92673 2214 aa7.38□□□□□ -1.23
SNRNP40-201ENST00000263694 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 OVOL1O14753 267 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 PF4P02776 101 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 CSN3P07498 182 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 UBE2L3P68036 154 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 SRSF3P84103 164 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 HAGHQ16775 308 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 IGFL4Q6B9Z1 124 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 BPIFA4PQ86YQ2 179 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 SLC7A5P1Q8MH63 180 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 GLMPQ8WWB7 406 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 RARRES2Q99969 163 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 ZNF586Q9NXT0 402 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 GNG13Q9P2W3 67 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 MLXQ9UH92 298 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 NOTCH3Q9UM47 2321 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 HBE1P02100 147 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 PQLC2Q6ZP29 291 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 NARS2Q96I59 477 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 TMEM231Q9H6L2 316 aa7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-201ENST00000263694 ZNF785A8K8V0 405 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 SLC17A3O00476 420 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 PAGE4O60829 102 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 NBEAP1P0C6P0 100 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 SIGLEC15Q6ZMC9 328 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 S100A7AQ86SG5 101 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 LINC00482Q8N8I6 264 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 TMEM14CQ9P0S9 112 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 PEMTQ9UBM1 199 aa7.36□□□□□ -1.23
SNRNP40-201ENST00000263694 A0A1W2PS18 150 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 LINC00862A6NCI5 91 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 NDUFB4O95168 129 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 HIST1H1EP10412 219 aaKnown RBP7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 RPL7P18124 248 aaKnown RBP7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 RANP62826 216 aaKnown RBP7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 TOR2AQ5JU69 321 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 C1orf194Q5T5A4 169 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 WFDC3Q8IUB2 231 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms