RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CEACAM4O75871 244 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 IFI27P40305 119 aaPredicted RBP10.36□□□□□ -0.75
SNX1-201ENST00000261889 BPIFB3P59826 476 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 SCNM1Q9BWG6 230 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 CST9LQ9H4G1 147 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 C7orf69Q9H7B7 122 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 TNFRSF1AP19438 455 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 MTURNQ8N3F0 131 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 Q8TAT8 98 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 TCRAP04437 139 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 ZNF788Q6ZQV5 615 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 PRSS3P2Q8NHM4 247 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 PLSCR4Q9NRQ2 329 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
SNX1-201ENST00000261889 FAM215AQ9Y5M1 114 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 CRYBG3Q68DQ2 2970 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 NMUP48645 174 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 GUSBP1Q15486 140 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 CTSZQ9UBR2 303 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 CENPEQ02224 2701 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 SPRY2O43597 315 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 FSTL3O95633 263 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 IGFL2Q6UWQ7 119 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 PPP1R14DQ9NXH3 145 aa10.35□□□□□ -0.75
SNX1-201ENST00000261889 MRPL27Q9P0M9 148 aaKnown RBP10.35□□□□□ -0.75
SNX1-201ENST00000261889 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 GLRXP35754 106 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 FNDC10F2Z333 226 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 H3BUT2 72 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 ZADH2Q8N4Q0 377 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 VSTM2AQ8TAG5 236 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 THYN1Q9P016 225 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 SORL1Q92673 2214 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 PNKDQ8N490 385 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 MAP1LC3CQ9BXW4 147 aa10.34□□□□□ -0.75
SNX1-201ENST00000261889 A8MWL6 223 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 COTL1Q14019 142 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 OR4C13Q8NGP0 309 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 CACNA1AO00555 2505 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 SPTBN4Q9H254 2564 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 GAGE12BA1L429 117 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 C7orf71A4D174 169 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 FAM231BA6NCW3 169 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 CD40P25942 277 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 CACNG7P62955 275 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 OCIAD2Q56VL3 154 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 LCNL1Q6ZST4 164 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 PCP2Q8IVA1 136 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 ADTRPQ96IZ2 230 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 MEGF9Q9H1U4 602 aa10.33□□□□□ -0.76
SNX1-201ENST00000261889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.32□□□□□ -0.76
SNX1-201ENST00000261889 TOMM40O96008 361 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 PERPQ96FX8 193 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 TMEM133Q9H2Q1 129 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 TRAV17A0A0B4J275 112 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 D6R8Y8 96 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 IGHG3P01860 377 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 JMJD8Q96S16 334 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
SNX1-201ENST00000261889 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 PTPRQQ9UMZ3 2332 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
SNX1-201ENST00000261889 CNIH1O95406 144 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
SNX1-201ENST00000261889 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 BSPH1Q075Z2 132 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 RBPMS2Q6ZRY4 209 aaKnown RBP10.32□□□□□ -0.76
SNX1-201ENST00000261889 MSRB1Q9NZV6 116 aa10.32□□□□□ -0.76
SNX1-201ENST00000261889 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 EVI2AP22794 236 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 FOXC1Q12948 553 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 CR1LQ2VPA4 569 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 CHODLQ9H9P2 273 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 AP5S1Q9NUS5 200 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 K7ERJ3 54 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 GP9P14770 177 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
SNX1-201ENST00000261889 GPR183P32249 361 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 Q86TA4 180 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 OR5AN1Q8NGI8 311 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 OSR1Q8TAX0 266 aaPredicted RBP10.31□□□□□ -0.76
SNX1-201ENST00000261889 C1RLQ9NZP8 487 aa10.31□□□□□ -0.76
SNX1-201ENST00000261889 GATA1P15976 413 aaPredicted RBP10.3□□□□□ -0.76
SNX1-201ENST00000261889 RPL27AP46776 148 aaKnown RBP10.3□□□□□ -0.76
SNX1-201ENST00000261889 KLF5Q13887 457 aaPredicted RBP10.3□□□□□ -0.76
SNX1-201ENST00000261889 TIMM23BQ5SRD1 257 aa10.3□□□□□ -0.76
SNX1-201ENST00000261889 NEU4Q8WWR8 484 aaPredicted RBP10.3□□□□□ -0.76
SNX1-201ENST00000261889 SCRT2Q9NQ03 307 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms