RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 DKK2Q9UBU2 259 aa13.57□□□□□ -0.24
TM6SF1-201ENST00000258909 GOLT1BQ9Y3E0 138 aa13.57□□□□□ -0.24
TM6SF1-201ENST00000258909 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
TM6SF1-201ENST00000258909 TRAV8-2A0A0B4J237 113 aa13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 NAP1L6A6NFF2 107 aa13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 IL5P05113 134 aa13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 RRAS2P62070 204 aaPredicted RBP13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 SAMD13Q5VXD3 122 aa13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 SDHCQ99643 169 aaPredicted RBP13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 FAT2Q9NYQ8 4349 aa13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 KIAA1109Q2LD37 5005 aa13.56□□□□□ -0.24
TM6SF1-201ENST00000258909 LOC102723971A0A1B0GUV8 181 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 PMS2P5A8MQ11 134 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 SCGB1D2O95969 90 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 IFNA21P01568 189 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 HBE1P02100 147 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 C4orf46Q504U0 113 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 AMTNQ6UX39 209 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 SLC25A39Q9BZJ4 359 aaPredicted RBP13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 H3BRN7 92 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 PRM2P04554 102 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 METTL15P1P0C7V9 234 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 HTN3P15516 51 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 BTCP35070 178 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 CNN1P51911 297 aaKnown RBP13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 UHRF2Q96PU4 802 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 YTHDF2Q9Y5A9 579 aaKnown RBP13.55□□□□□ -0.24
TM6SF1-201ENST00000258909 ZNF701M0R085 212 aaPredicted RBP13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 OR5G3P0C626 314 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 LINC00869P0C866 280 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 P0DMU3 169 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 FAM231AP0DMU4 169 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 FAM231CP0DMU5 169 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 RAP2BP61225 183 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 POM121L12Q8N7R1 296 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 SMIM8Q96KF7 97 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 GPR82Q96P67 336 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 SHANK2-AS3Q9BTD1 123 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 TMEM208Q9BTX3 173 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 HIGD1AQ9Y241 93 aa13.54□□□□□ -0.24
TM6SF1-201ENST00000258909 M0R2N4 97 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 M0R2Z0 102 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 HYPMO75409 117 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 SPINK13Q1W4C9 94 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 RRN3P1Q2M238 152 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 IGF2BP2-AS1Q96M15 143 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 GSKIPQ9P0R6 139 aa13.53□□□□□ -0.24
TM6SF1-201ENST00000258909 A8MTW9 85 aa13.52□□□□□ -0.25
TM6SF1-201ENST00000258909 S100A7P31151 101 aa13.52□□□□□ -0.25
TM6SF1-201ENST00000258909 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
TM6SF1-201ENST00000258909 OR11H7Q8NGC8 314 aa13.52□□□□□ -0.25
TM6SF1-201ENST00000258909 CENPXA8MT69 81 aa13.51□□□□□ -0.25
TM6SF1-201ENST00000258909 IL7P13232 177 aa13.51□□□□□ -0.25
TM6SF1-201ENST00000258909 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
TM6SF1-201ENST00000258909 ARL6Q9H0F7 186 aa13.51□□□□□ -0.25
TM6SF1-201ENST00000258909 ZNF705GA8MUZ8 300 aaPredicted RBP13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 DUSP14O95147 198 aaKnown RBP13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 DLK1P80370 383 aa13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 SLC38A11Q08AI6 406 aa13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 PATE2Q6UY27 113 aa13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 BAP18Q8IXM2 172 aa13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 ZBTB8BQ8NAP8 495 aaPredicted RBP13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 NPVFQ9HCQ7 196 aa13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 RCL1Q9Y2P8 373 aaKnown RBP13.5□□□□□ -0.25
TM6SF1-201ENST00000258909 TRAV12-2A0A075B6T6 113 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 TEX48A0A1B0GUV7 120 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 SNRPCP09234 159 aaKnown RBP13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 RPL7P18124 248 aaKnown RBP13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 PLP1P60201 277 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 SELENOTP62341 195 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 ARL16Q0P5N6 197 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 OR10P1Q8NGE3 313 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 MGAT4CQ9UBM8 478 aa13.49□□□□□ -0.25
TM6SF1-201ENST00000258909 CCSO14618 274 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 INSP01308 110 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 DAD1P61803 113 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 HIST1H1AQ02539 215 aaPredicted RBP13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 UBE2DNLQ8IWF7 75 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 MITD1Q8WV92 249 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 MBPP02686 304 aaPredicted RBP13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 CXCL3P19876 107 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 TEPPQ6URK8 271 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 LRRC20Q8TCA0 184 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 KRTAP17-1Q9BYP8 105 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 ARV1Q9H2C2 271 aa13.48□□□□□ -0.25
TM6SF1-201ENST00000258909 PKHD1P08F94 4074 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 IGLV2-18A0A075B6J9 118 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 C7orf66A4D0T2 115 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 PLA2G10O15496 165 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 TSC22D2O75157 780 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 RHOBP62745 196 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 OXA1LQ15070 435 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 FAM210BQ96KR6 192 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 C20orf85Q9H1P6 137 aa13.47□□□□□ -0.25
TM6SF1-201ENST00000258909 A0A087X0K7 114 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms