RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 C2orf70A6NJV1 201 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 PPIFP30405 207 aaKnown RBP9.61□□□□□ -0.87
USHBP1-201ENST00000252597 TMEM108Q6UXF1 575 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 POLQO75417 2590 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 NCR2O95944 276 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 TCRAP04437 139 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 CACNG8Q8WXS5 425 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 IGHV2-26A0A0B4J1V2 119 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 FAM106CPP0CH98 169 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 BSPH1Q075Z2 132 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 FAM106AQ4KMX7 169 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 BPIFA4PQ86YQ2 179 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
USHBP1-201ENST00000252597 C1orf162Q8NEQ5 155 aaPredicted RBP9.6□□□□□ -0.87
USHBP1-201ENST00000252597 ORAOV1Q8WV07 137 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 DSCAML1Q8TD84 2053 aa9.6□□□□□ -0.87
USHBP1-201ENST00000252597 J3KRW8 73 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 RBPMS2Q6ZRY4 209 aaKnown RBP9.59□□□□□ -0.87
USHBP1-201ENST00000252597 RPEQ96AT9 228 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 C19orf24Q9BVV8 132 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
USHBP1-201ENST00000252597 ACACBO00763 2458 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 K7EMI3 77 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 IL4P05112 153 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 FOXE3Q13461 319 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 PIP4P1Q86T03 277 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 MBD6Q96DN6 1003 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 THYN1Q9P016 225 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 IGHV1-69-2A0A0G2JMI3 117 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 IGHG3P01860 377 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 HLA-DRB1P01911 266 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 CGB3P0DN86 165 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 CGB7P0DN87 165 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 CHODLQ9H9P2 273 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 LINC00312Q9Y6C7 94 aa9.59□□□□□ -0.87
USHBP1-201ENST00000252597 IGHV3-49A0A0A0MS15 119 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 IGHV3-66A0A0C4DH42 116 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 PRSS47A8MTI9 375 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 FCER1GP30273 86 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 URB1-AS1Q96HZ7 61 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 IGKV1D-37A0A075B6S9 117 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 LOC105371242A0A075B767 164 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 TMEM213A2RRL7 107 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
USHBP1-201ENST00000252597 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
USHBP1-201ENST00000252597 Q8TAT8 98 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 PPP1R14DQ9NXH3 145 aa9.58□□□□□ -0.88
USHBP1-201ENST00000252597 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
USHBP1-201ENST00000252597 H3BUT2 72 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 LHBP01229 141 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 FOXC1Q12948 553 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 AARDQ4LEZ3 155 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 LIPFP07098 398 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 CACNG7P62955 275 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 PSG9Q00887 426 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 FAM215AQ9Y5M1 114 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 DOPEY2Q9Y3R5 2298 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 MYO18BQ8IUG5 2567 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 A0A1B0GUT8 65 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 C7orf71A4D174 169 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 C17orf100A8MU93 164 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 GPR183P32249 361 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 LOXL1Q08397 574 aaPredicted RBP9.57□□□□□ -0.88
USHBP1-201ENST00000252597 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
USHBP1-201ENST00000252597 USP9YO00507 2555 aaPredicted RBP9.57□□□□□ -0.88
USHBP1-201ENST00000252597 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
USHBP1-201ENST00000252597 STXBP6Q8NFX7 210 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 TMEM133Q9H2Q1 129 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 HSPB8Q9UJY1 196 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 D6R8Y8 96 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 C16orf97H3BN30 126 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 SAP30O75446 220 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 ORM1P02763 201 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 CSN1S1P47710 185 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 GUSBP1Q15486 140 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 BVES-AS1Q5T3Y7 98 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 C8orf49Q96NF6 230 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 TTTY13Q9BZ97 58 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 TRAV8-6A0A0B4J262 113 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 NBL1P41271 181 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 RBX1P62877 108 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 TWIST1Q15672 202 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 C1orf185Q5T7R7 199 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 C12orf54Q6X4T0 127 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 BCL6BQ8N143 479 aaPredicted RBP9.56□□□□□ -0.88
USHBP1-201ENST00000252597 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 TMEM167AQ8TBQ9 72 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
USHBP1-201ENST00000252597 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
USHBP1-201ENST00000252597 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms