RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 RAB2BQ8WUD1 216 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 TRIM63Q969Q1 353 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 C20orf173Q96LM9 149 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 SCGB3A2Q96PL1 93 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 BCL7BQ9BQE9 202 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 SLIRPQ9GZT3 109 aaKnown RBP7.31□□□□□ -1.24
VPS50-201ENST00000251739 SLC45A2Q9UMX9 530 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 SNRPGP15A8MWD9 76 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 FABP1P07148 127 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 SLC25A6P12236 298 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 MEOX2P50222 304 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 EMP1P54849 157 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 LINC00310P59036 64 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 PSG9Q00887 426 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 OR2F1Q13607 317 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 RNF212Q495C1 297 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 OR1S1Q8NH92 325 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 COQ8AQ8NI60 647 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 LINC00052Q96N35 136 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 NIPSNAP3BQ9BS92 247 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 SLC25A32Q9H2D1 315 aa7.3□□□□□ -1.24
VPS50-201ENST00000251739 RSL24D1Q9UHA3 163 aaKnown RBP7.3□□□□□ -1.24
VPS50-201ENST00000251739 IGHV3OR16-12A0A075B7B8 117 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 LOC102723971A0A1B0GUV8 181 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 NPIPB6E9PJ23 425 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 M0R2N4 97 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 CFDP00746 253 aaPredicted RBP7.29□□□□□ -1.24
VPS50-201ENST00000251739 S100A6P06703 90 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 ANXA3P12429 323 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 TNFSF8P32971 234 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 TMBIM6P55061 237 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 OR8I2Q8N0Y5 310 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 OR4B1Q8NGF8 309 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 RPRMQ9NS64 109 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 MCUBQ9NWR8 336 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 DOK5Q9P104 306 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 GOLT1BQ9Y3E0 138 aa7.29□□□□□ -1.24
VPS50-201ENST00000251739 YTHDF2Q9Y5A9 579 aaKnown RBP7.29□□□□□ -1.24
VPS50-201ENST00000251739 PIGBOS1A0A0B4J2F0 54 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 ZNF98A6NK75 572 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 CRXO43186 299 aaPredicted RBP7.28□□□□□ -1.24
VPS50-201ENST00000251739 HBE1P02100 147 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 IAPPP10997 89 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 TMEM128Q5BJH2 165 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 EBLN2Q6P2I7 272 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 TMEM88Q6PEY1 159 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 OR4D5Q8NGN0 318 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 IGF2BP2-AS1Q96M15 143 aa7.28□□□□□ -1.24
VPS50-201ENST00000251739 IGLV2-18A0A075B6J9 118 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 A0A1B0GVG6 124 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 PLAC8L1A1L4L8 177 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 H3BMQ9 156 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 GALR1P47211 349 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 RAB11AP62491 216 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 RRN3P1Q2M238 152 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 GGNBP1Q5YKI7 109 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 Q6ZNX1 250 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 TMEM182Q6ZP80 229 aaPredicted RBP7.27□□□□□ -1.25
VPS50-201ENST00000251739 OR11H7Q8NGC8 314 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 GPR82Q96P67 336 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 CIB3Q96Q77 187 aaPredicted RBP7.27□□□□□ -1.25
VPS50-201ENST00000251739 V9GYH0 126 aa7.27□□□□□ -1.25
VPS50-201ENST00000251739 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
VPS50-201ENST00000251739 FABP12A6NFH5 140 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 SYNGR2O43760 224 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 MED6O75586 246 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 IFNA21P01568 189 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 TSPOP30536 169 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 CNN1P51911 297 aaKnown RBP7.26□□□□□ -1.25
VPS50-201ENST00000251739 FAM3BP58499 235 aaPredicted RBP7.26□□□□□ -1.25
VPS50-201ENST00000251739 DAD1P61803 113 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 ACOT7LQ6ZUV0 252 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 TMED4Q7Z7H5 227 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 OR1B1Q8NGR6 318 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 DEDD2Q8WXF8 326 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 C16orf92Q96LL3 132 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 RSG1Q9BU20 258 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 TMED3Q9Y3Q3 217 aa7.26□□□□□ -1.25
VPS50-201ENST00000251739 LYRM9A8MSI8 78 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 H3BRN7 92 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 M0R2Z0 102 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 SFT2D2O95562 160 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 INSP01308 110 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 HTN3P15516 51 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 GATA2P23769 480 aaPredicted RBP7.25□□□□□ -1.25
VPS50-201ENST00000251739 FAUP35544 74 aaKnown RBP7.25□□□□□ -1.25
VPS50-201ENST00000251739 PPP1R1AQ13522 171 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 C4orf46Q504U0 113 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 SLC51BQ86UW2 128 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 C15orf53Q8NAA6 179 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 BPIFCQ8NFQ6 507 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 MCFD2Q8NI22 146 aa7.25□□□□□ -1.25
VPS50-201ENST00000251739 SLC25A21Q9BQT8 299 aaPredicted RBP7.25□□□□□ -1.25
VPS50-201ENST00000251739 C7orf50Q9BRJ6 194 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms