RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 FUT9Q9Y231 359 aa10.05□□□□□ -0.8
HIF3A-201ENST00000244302 OR2T8A6NH00 312 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 IGKV1-17P01599 117 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 SNRPCP09234 159 aaKnown RBP10.04□□□□□ -0.8
HIF3A-201ENST00000244302 PRR20EP86478 221 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 PRR20CP86479 221 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 PRR20DP86480 221 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 PRR20BP86481 221 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 PRR20AP86496 221 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 M0QZK8 103 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 IGLC1P0CG04 106 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 STAG3L2P0CL84 134 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 SRD5A1P18405 259 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 RPL15P61313 204 aaKnown RBP10.04□□□□□ -0.8
HIF3A-201ENST00000244302 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 TMEM37Q8WXS4 190 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 UHRF2Q96PU4 802 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 C2orf88Q9BSF0 95 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 CHRDL1Q9BU40 450 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 PRO1933Q9H354 126 aa10.04□□□□□ -0.8
HIF3A-201ENST00000244302 A8MWP6 167 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 TRBV12-3P01733 135 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 FAM78BQ5VT40 261 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 CST9LP1Q5W188 147 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 GBGT1Q8N5D6 347 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 THAP8Q8NA92 274 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 TRAV5A0A0B4J249 113 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 FNDC10F2Z333 226 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 ATP5G3P48201 142 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 LY96Q9Y6Y9 160 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 ARL2-SNX15V9GYD0 113 aa10.03□□□□□ -0.8
HIF3A-201ENST00000244302 C2CD3Q4AC94 2353 aa10.02□□□□□ -0.8
HIF3A-201ENST00000244302 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 NDUFB4O95168 129 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 TRGV3P03979 118 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 CLEC3BP05452 202 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 PF4V1P10720 104 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 PSG1P11464 419 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 ADMP35318 185 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
HIF3A-201ENST00000244302 CRIP2P52943 208 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-201ENST00000244302 TAS2R60P59551 318 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 UBE2G2P60604 165 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 CFHR3Q02985 330 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 Q56UQ5 140 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 CCDC140Q96MF4 163 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF320A2RRD8 509 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 CORTO00230 105 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 CTSGP08311 255 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 ORM2P19652 201 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 HNF1AP20823 631 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 GPR183P32249 361 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 TPPP2P59282 170 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 ETFRF1Q6IPR1 90 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 MIR17HGQ75NE6 70 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 SERTAD4Q9NUC0 356 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 PSMB11A5LHX3 300 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
HIF3A-201ENST00000244302 RAB31Q13636 194 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 LEMD1Q68G75 181 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 Q6ZSV7 163 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 C11orf52Q96A22 123 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 PRSS22Q9GZN4 317 aa10.01□□□□□ -0.81
HIF3A-201ENST00000244302 C9JCJ5 164 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 IGLV1-40P01703 118 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 RAB4BP61018 213 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 RHOBP62745 196 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF502Q8TBZ5 544 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 NPFFR1Q9GZQ6 430 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 GNG7O60262 68 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 RAB9AP51151 201 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 MFAP4P55083 255 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 OR1B1Q8NGR6 318 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 TRGV9Q99603 122 aa10□□□□□ -0.81
HIF3A-201ENST00000244302 TENM1Q9UKZ4 2725 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF705GA8MUZ8 300 aaPredicted RBP9.99□□□□□ -0.81
HIF3A-201ENST00000244302 RPLP1P05386 114 aaKnown RBP9.99□□□□□ -0.81
HIF3A-201ENST00000244302 GCHFRP30047 84 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 SELENOTP62341 195 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 TEX38Q6PEX7 206 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 C11orf44Q8N8P7 122 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 OR1L6Q8NGR2 347 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 TMEM160Q9NX00 188 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 THYN1Q9P016 225 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 CDC42EP3Q9UKI2 254 aa9.99□□□□□ -0.81
HIF3A-201ENST00000244302 OR5G3P0C626 314 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms