RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TMEM11P17152 192 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 FCGR2BP31994 310 aaPredicted RBP12.71□□□□□ -0.37
UBE3D-201ENST00000237186 LMO4P61968 165 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 Q6ZWC4 215 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 C14orf144Q96I85 54 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 TBX15Q96SF7 602 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 RPP21Q9H633 154 aaKnown RBP12.71□□□□□ -0.37
UBE3D-201ENST00000237186 C1RLQ9NZP8 487 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 NAGKQ9UJ70 344 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 A8MWL6 223 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 OR2J3O76001 311 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 GPX1P07203 203 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 FAM106CPP0CH98 169 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 EGR2P11161 476 aaPredicted RBP12.7□□□□□ -0.38
UBE3D-201ENST00000237186 SIGLEC15Q6ZMC9 328 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 LURAP1LQ8IV03 231 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 SOX21Q9Y651 276 aaPredicted RBP12.7□□□□□ -0.38
UBE3D-201ENST00000237186 ARHGAP32A7KAX9 2087 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 IGHV7-81A0A0B4J1V7 117 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 OVOL3O00110 214 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 TOX4O94842 621 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 SCGB1D1O95968 90 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 HLA-DRB1P01911 266 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 SRIP30626 198 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 SLAQ13239 276 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 PDE6HQ13956 83 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 KIAA1644Q3SXP7 199 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 GDF5OSQ5U4N7 250 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 Q86TA4 180 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 EXOC3-AS1Q8N2X6 119 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 Q8N9W7 124 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
UBE3D-201ENST00000237186 SPTBN1Q01082 2364 aaKnown RBP12.69□□□□□ -0.38
UBE3D-201ENST00000237186 ZNF253O75346 499 aa12.69□□□□□ -0.38
UBE3D-201ENST00000237186 P01737 135 aa12.69□□□□□ -0.38
UBE3D-201ENST00000237186 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
UBE3D-201ENST00000237186 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
UBE3D-201ENST00000237186 TXN2Q99757 166 aa12.69□□□□□ -0.38
UBE3D-201ENST00000237186 TACC2O95359 2948 aa12.69□□□□□ -0.38
UBE3D-201ENST00000237186 OR4B1Q8NGF8 309 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 HSPB9Q9BQS6 159 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 LPAR2Q9HBW0 351 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 ZFP30Q9Y2G7 519 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 C19orf84I3L1E1 186 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 NDUFB8O95169 186 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 KLF5Q13887 457 aaPredicted RBP12.68□□□□□ -0.38
UBE3D-201ENST00000237186 C1orf194Q5T5A4 169 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 DAZAP1Q96EP5 407 aaKnown RBP12.68□□□□□ -0.38
UBE3D-201ENST00000237186 KCNS1Q96KK3 526 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 SAMD10Q9BYL1 202 aa12.68□□□□□ -0.38
UBE3D-201ENST00000237186 POLR3KQ9Y2Y1 108 aaPredicted RBP12.68□□□□□ -0.38
UBE3D-201ENST00000237186 A0A1W2PS18 150 aa12.67□□□□□ -0.38
UBE3D-201ENST00000237186 FOXA3P55318 350 aaPredicted RBP12.67□□□□□ -0.38
UBE3D-201ENST00000237186 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
UBE3D-201ENST00000237186 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
UBE3D-201ENST00000237186 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
UBE3D-201ENST00000237186 TRAV8-1A0A0A6YYK1 113 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 SCGB2A1O75556 95 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 Q56UQ5 140 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 C18orf32Q8TCD1 76 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 VN1R17PQ8TDU5 208 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 IGSF10Q6WRI0 2623 aa12.66□□□□□ -0.38
UBE3D-201ENST00000237186 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 K7EQM0 130 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 CTSGP08311 255 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 TCF24Q7RTU0 167 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 RCHY1Q96PM5 261 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 KIR2DL5BA0A0G2JN68 375 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 KIR2DL5BA0A0G2JPC4 375 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 SAA4P35542 130 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 HBBP68871 147 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 PSG3Q16557 428 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 TEX43Q6ZNM6 134 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
UBE3D-201ENST00000237186 PRNTQ86SH4 94 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 KIR2DL5AQ8N109 375 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 CIARTQ8N365 385 aaPredicted RBP12.65□□□□□ -0.38
UBE3D-201ENST00000237186 FAM110DQ8TAY7 271 aaPredicted RBP12.65□□□□□ -0.38
UBE3D-201ENST00000237186 ALKBH7Q9BT30 221 aaPredicted RBP12.65□□□□□ -0.38
UBE3D-201ENST00000237186 S4R3C0 116 aa12.65□□□□□ -0.38
UBE3D-201ENST00000237186 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 DIRC3C9JPN6 131 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 ZNF324O75467 553 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-201ENST00000237186 CD33P20138 364 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 COL8A1P27658 744 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-201ENST00000237186 PSG8Q9UQ74 426 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 CFAP46Q8IYW2 2715 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 USP24Q9UPU5 2620 aa12.64□□□□□ -0.39
UBE3D-201ENST00000237186 CAMPP49913 170 aa12.63□□□□□ -0.39
UBE3D-201ENST00000237186 NRN1Q9NPD7 142 aa12.63□□□□□ -0.39
UBE3D-201ENST00000237186 FBXL7Q9UJT9 491 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms