RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 KIF23Q02241 960 aaPredicted RBP25.27■■□□□ 1.64
CHRNA7-220ENST00000636850 LDLRAD1Q5T700 205 aa25.27■■□□□ 1.64
CHRNA7-220ENST00000636850 ERICH6Q7L0X2 663 aa25.27■■□□□ 1.64
CHRNA7-220ENST00000636850 TLR7Q9NYK1 1049 aaKnown RBP25.27■■□□□ 1.64
CHRNA7-220ENST00000636850 HSPA8P11142 646 aaKnown RBP25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 MAP3K11Q16584 847 aa25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 COL13A1Q5TAT6 717 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 CDC42EP5Q6NZY7 148 aa25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 FAM83AQ86UY5 434 aa25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 SLF2Q8IX21 1173 aa25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 EAF2Q96CJ1 260 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 CCDC8Q9H0W5 538 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 GAKO14976 1311 aa25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 RPAP1Q9BWH6 1393 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-220ENST00000636850 CA12O43570 354 aa25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 IREB2P48200 963 aaKnown RBP25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 LBX1P52954 281 aa25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 RRP1P56182 461 aaKnown RBP25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 MECOMQ03112 1051 aa25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 TBC1D9Q6ZT07 1266 aa25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 AACSQ86V21 672 aa25.24■■□□□ 1.63
CHRNA7-220ENST00000636850 MROH7-TTC4A0A0A0MT08 1334 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 APBB1O00213 710 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 RHPN1Q8TCX5 695 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 ZNF512BQ96KM6 892 aaPredicted RBP25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 IL1RAPL2Q9NP60 686 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 PRDM10Q9NQV6 1147 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 SNRKQ9NRH2 765 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 USP40Q9NVE5 1235 aa25.23■■□□□ 1.63
CHRNA7-220ENST00000636850 CASP8AP2Q9UKL3 1982 aa25.22■■□□□ 1.63
CHRNA7-220ENST00000636850 USP2O75604 605 aaPredicted RBP25.22■■□□□ 1.63
CHRNA7-220ENST00000636850 KIF1BPQ96EK5 621 aa25.22■■□□□ 1.63
CHRNA7-220ENST00000636850 RAI14Q9P0K7 980 aa25.22■■□□□ 1.63
CHRNA7-220ENST00000636850 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.22■■□□□ 1.63
CHRNA7-220ENST00000636850 TSKSQ9UJT2 592 aa25.22■■□□□ 1.63
CHRNA7-220ENST00000636850 CDK5RAP2Q96SN8 1893 aa25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 GSTO1P78417 241 aa25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 MKRN3Q13064 507 aaKnown RBP25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 ZNF384Q8TF68 577 aa25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 FAM163AQ96GL9 167 aaPredicted RBP25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 CLMNQ96JQ2 1002 aa25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 LRP2BPQ9P2M1 347 aa25.21■■□□□ 1.63
CHRNA7-220ENST00000636850 RFX7Q2KHR2 1363 aa25.2■■□□□ 1.63
CHRNA7-220ENST00000636850 UNCXA6NJT0 531 aa25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 BTDP43251 543 aa25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 TCP10Q12799 353 aa25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 NFIAQ12857 509 aa25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 REM2Q8IYK8 340 aaPredicted RBP25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 ANKRD13AQ8IZ07 590 aa25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 NSUN4Q96CB9 384 aaKnown RBP25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 CSRNP1Q96S65 589 aa25.2■■□□□ 1.62
CHRNA7-220ENST00000636850 RAB11FIP3O75154 756 aa25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 SPRYD7Q5W111 196 aa25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 CLASRPQ8N2M8 674 aaKnown RBP25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 FAM151AQ8WW52 585 aa25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 HOOK2Q96ED9 719 aa25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 SLC10A4Q96EP9 437 aa25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 FOCADQ5VW36 1801 aa25.19■■□□□ 1.62
CHRNA7-220ENST00000636850 ZAP70P43403 619 aa25.18■■□□□ 1.62
CHRNA7-220ENST00000636850 FAM198AQ9UFP1 575 aa25.18■■□□□ 1.62
CHRNA7-220ENST00000636850 CYP2E1P05181 493 aaPredicted RBP25.17■■□□□ 1.62
CHRNA7-220ENST00000636850 LDHCP07864 332 aa25.17■■□□□ 1.62
CHRNA7-220ENST00000636850 WNK4Q96J92 1243 aa25.17■■□□□ 1.62
CHRNA7-220ENST00000636850 SAGE1Q9NXZ1 904 aa25.17■■□□□ 1.62
CHRNA7-220ENST00000636850 GPR75-ASB3A0A0A6YYF3 556 aa25.16■■□□□ 1.62
CHRNA7-220ENST00000636850 RGS3P49796 1198 aa25.16■■□□□ 1.62
CHRNA7-220ENST00000636850 DCAF15Q66K64 600 aa25.16■■□□□ 1.62
CHRNA7-220ENST00000636850 IDI2Q9BXS1 227 aa25.16■■□□□ 1.62
CHRNA7-220ENST00000636850 BCL11AQ9H165 835 aa25.16■■□□□ 1.62
CHRNA7-220ENST00000636850 ZBTB48P10074 688 aaPredicted RBP25.15■■□□□ 1.62
CHRNA7-220ENST00000636850 SREBF2Q12772 1141 aa25.15■■□□□ 1.62
CHRNA7-220ENST00000636850 TNS4Q8IZW8 715 aa25.15■■□□□ 1.62
CHRNA7-220ENST00000636850 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.15■■□□□ 1.62
CHRNA7-220ENST00000636850 PIH1D3Q9NQM4 214 aaKnown RBP25.15■■□□□ 1.62
CHRNA7-220ENST00000636850 RNF186Q9NXI6 227 aa25.15■■□□□ 1.62
CHRNA7-220ENST00000636850 ENTPD3O75355 529 aa25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 WDHD1O75717 1129 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 IFIT2P09913 472 aaKnown RBP25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 VGLL4Q14135 290 aa25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 NAA16Q6N069 864 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 ELP3Q9H9T3 547 aa25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 CSADQ9Y600 493 aa25.14■■□□□ 1.62
CHRNA7-220ENST00000636850 TRPA1O75762 1119 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 RHBDL3P58872 404 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 MAP3K9P80192 1104 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 PICALMQ13492 652 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 WRNIP1Q96S55 665 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 NOL10Q9BSC4 688 aaKnown RBP25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 NDUFB9Q9Y6M9 179 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 MYH7P12883 1935 aa25.13■■□□□ 1.61
CHRNA7-220ENST00000636850 MIGA2Q7L4E1 593 aa25.12■■□□□ 1.61
CHRNA7-220ENST00000636850 ZFPM1Q8IX07 1006 aa25.12■■□□□ 1.61
CHRNA7-220ENST00000636850 OPTNQ96CV9 577 aa25.12■■□□□ 1.61
CHRNA7-220ENST00000636850 ZNF341Q9BYN7 854 aa25.12■■□□□ 1.61
CHRNA7-220ENST00000636850 DDX4Q9NQI0 724 aaKnown RBP25.12■■□□□ 1.61
CHRNA7-220ENST00000636850 MANSC4A6NHS7 340 aaPredicted RBP25.11■■□□□ 1.61
CHRNA7-220ENST00000636850 GJA5P36382 358 aa25.11■■□□□ 1.61
CHRNA7-220ENST00000636850 TM4SF4P48230 202 aa25.11■■□□□ 1.61
CHRNA7-220ENST00000636850 ZSCAN29Q8IWY8 852 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms