RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 SEC31BQ9NQW1 1179 aa10.66□□□□□ -0.7
SMARCA2-239ENST00000635388 PRDM6Q9NQX0 595 aa10.66□□□□□ -0.7
SMARCA2-239ENST00000635388 SIGLEC1Q9BZZ2 1709 aa10.66□□□□□ -0.7
SMARCA2-239ENST00000635388 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
SMARCA2-239ENST00000635388 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 ZNF385CQ66K41 422 aaPredicted RBP10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 NECAB3Q96P71 396 aaPredicted RBP10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 TRIM56Q9BRZ2 755 aaKnown RBP10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 MAGI2Q86UL8 1455 aa10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 MADDQ8WXG6 1647 aa10.65□□□□□ -0.7
SMARCA2-239ENST00000635388 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 ENC1O14682 589 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 CELA3AP09093 270 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 CDC27P30260 824 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 ZNF423Q2M1K9 1284 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 YEATS2Q9ULM3 1422 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 TIAM1Q13009 1591 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
SMARCA2-239ENST00000635388 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 FER1L4A9Z1Z3 1794 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 LILRB5O75023 590 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 B3GALT4O96024 378 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 ESRRAP11474 423 aaPredicted RBP10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 DGKGP49619 791 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 PCDH1Q08174 1060 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 SV2BQ7L1I2 683 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 HS2ST1Q7LGA3 356 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 CACTIN-AS1Q8N1I8 211 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 VPS8Q8N3P4 1428 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
SMARCA2-239ENST00000635388 NID1P14543 1247 aa10.62□□□□□ -0.71
SMARCA2-239ENST00000635388 ERCC5P28715 1186 aaPredicted RBP10.62□□□□□ -0.71
SMARCA2-239ENST00000635388 CCDC85BQ15834 202 aaPredicted RBP10.62□□□□□ -0.71
SMARCA2-239ENST00000635388 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
SMARCA2-239ENST00000635388 DIP2CQ9Y2E4 1556 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 H3BRJ5 948 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 TM4SF5O14894 197 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 ZNF394Q53GI3 561 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 CEP44Q9C0F1 390 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 GGT7Q9UJ14 662 aa10.61□□□□□ -0.71
SMARCA2-239ENST00000635388 ARID4BQ4LE39 1312 aaPredicted RBP10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 KIDINS220Q9ULH0 1771 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 GPATCH8Q9UKJ3 1502 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 PAGE1O75459 146 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 RACK1P63244 317 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 IL22RA1Q8N6P7 574 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 TGIF2Q9GZN2 237 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 GPN3Q9UHW5 284 aaPredicted RBP10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 DDX41Q9UJV9 622 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 PCDHGB7Q9Y5F8 929 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 CCNB3Q8WWL7 1395 aa10.6□□□□□ -0.71
SMARCA2-239ENST00000635388 C9orf84Q5VXU9 1444 aa10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 SOX1O00570 391 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 WIPF1O43516 503 aa10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 HGSNATQ68CP4 663 aa10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 RSRP1Q9BUV0 290 aa10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 TMEM39AQ9NV64 488 aa10.59□□□□□ -0.71
SMARCA2-239ENST00000635388 TRAPPC8Q9Y2L5 1435 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 ATP10AO60312 1499 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 ARHGEF15O94989 841 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 AMPD1P23109 780 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 ZNF157P51786 506 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 IKBKEQ14164 716 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 TXNDC11Q6PKC3 985 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 C8orf37Q96NL8 207 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 KBTBD4Q9NVX7 518 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 PPME1Q9Y570 386 aa10.58□□□□□ -0.72
SMARCA2-239ENST00000635388 REREQ9P2R6 1566 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 PTPRMP28827 1452 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 LIG3P49916 1009 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 RASIP1Q5U651 963 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 RHOVQ96L33 236 aa10.57□□□□□ -0.72
SMARCA2-239ENST00000635388 INO80Q9ULG1 1556 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 NCOA2Q15596 1464 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 MLH3Q9UHC1 1453 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 CABP4P57796 275 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 WFDC8Q8IUA0 241 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 SVOPQ8N4V2 548 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 AFAP1Q8N556 730 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 STK35Q8TDR2 534 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 NRSN2Q9GZP1 204 aa10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 SOX17Q9H6I2 414 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-239ENST00000635388 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 F6X3S4 739 aa10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 LINC01387J3KSC0 135 aa10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 PHC3Q8NDX5 983 aa10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 CFDP1Q9UEE9 299 aaPredicted RBP10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.55□□□□□ -0.72
SMARCA2-239ENST00000635388 LRRC9Q6ZRR7 1453 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms