RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 AFDNP55196 1824 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 SGSM2O43147 1006 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 PDE4BQ07343 736 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 KLHL40Q2TBA0 621 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 SULF1Q8IWU6 871 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 RRAGDQ9NQL2 400 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 HELLSQ9NRZ9 838 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 NUP188Q5SRE5 1749 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 CPLX1O14810 134 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 DCPSQ96C86 337 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 CHAMP1Q96JM3 812 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 CFAP100Q494V2 611 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 STRIP1Q5VSL9 837 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 SDR42E1Q8WUS8 393 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 RNF41Q9H4P4 317 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 MRE11P49959 708 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 DYNLL1P63167 89 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 MFSD6Q6ZSS7 791 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 UPF3BQ9BZI7 483 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 CABP5Q9NP86 173 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 RAD50Q92878 1312 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 CACNB3P54284 484 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 SLFNL1Q499Z3 407 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 CPLX2Q6PUV4 134 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 TTC6Q86TZ1 520 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 SLC51AQ86UW1 340 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 CYP46A1Q9Y6A2 500 aa14.66□□□□□ -0.06
SYNGAP1-207ENST00000628646 MYO3BQ8WXR4 1341 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 A0A0D9SFI3 127 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 PTGER2P43116 358 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 TTC14Q96N46 770 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 CNOT7Q9UIV1 285 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 TNFAIP1Q13829 316 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 TDRD7Q8NHU6 1098 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 TJP1Q07157 1748 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 KDM4AO75164 1064 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 CRKP46108 304 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 CXCL9Q07325 125 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 KRT32Q14532 448 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 MICALL2Q8IY33 904 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 NUP133Q8WUM0 1156 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 FEZ1Q99689 392 aa14.65□□□□□ -0.06
SYNGAP1-207ENST00000628646 FGFR2P21802 821 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 ARID4AP29374 1257 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 PSMD1Q99460 953 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 CASTP20810 708 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 UBE3CQ15386 1083 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 GPT2Q8TD30 523 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 TDRD3Q9H7E2 651 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 TPRNQ4KMQ1 711 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
SYNGAP1-207ENST00000628646 BRD1O95696 1058 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 ADD2P35612 726 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 CERS3Q8IU89 383 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 KCNB2Q92953 911 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 STX8Q9UNK0 236 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 DDNO94850 711 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 TRIM44Q96DX7 344 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 KCNQ5Q9NR82 932 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 ATP6V1DQ9Y5K8 247 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 ZNF609O15014 1411 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 PRDM1O75626 825 aa14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-207ENST00000628646 TCHHQ07283 1943 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 CCDC69A6NI79 296 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 USP17L12C9JPN9 530 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 USP17L21D6R901 530 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 SNX14Q9Y5W7 946 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 NUP98P52948 1817 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 TSPY3P0CV98 308 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 TSPY8P0CW00 308 aa14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 PUS7LQ9H0K6 701 aaKnown RBP14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 RPAP1Q9BWH6 1393 aaPredicted RBP14.62□□□□□ -0.07
SYNGAP1-207ENST00000628646 IQCA1LA6NCM1 817 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 VGLL2Q8N8G2 317 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 KLRG2A4D1S0 409 aaPredicted RBP14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 IFIT3O14879 490 aaKnown RBP14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 ZNF445P59923 1031 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 STK3Q13188 491 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 MCTP1Q6DN14 999 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 SAMD7Q7Z3H4 446 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 OSBP2Q969R2 916 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 LCORLQ8N3X6 602 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 PRKAB2O43741 272 aa14.61□□□□□ -0.07
SYNGAP1-207ENST00000628646 TCEANC2Q96MN5 208 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms