RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ATP8B2P98198 1209 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 CHAF1AQ13111 956 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 CEP85Q6P2H3 762 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 PNMA8AQ86V59 439 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 TXNRD3Q86VQ6 643 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 OGFOD1Q8N543 542 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 SMC1BQ8NDV3 1235 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 LPIN2Q92539 896 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 NEUROD6Q96NK8 337 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 TAF1DQ9H5J8 278 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 CD209Q9NNX6 404 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 GNL3LQ9NVN8 582 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 GPRC5DQ9NZD1 345 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 IQSEC3Q9UPP2 1182 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 MYH13Q9UKX3 1938 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 MYO3BQ8WXR4 1341 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 PSME4Q14997 1843 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 APBB1O00213 710 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 SCNN1DP51172 638 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 TFCP2Q12800 502 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 HSP90AB4PQ58FF6 505 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 RBM26Q5T8P6 1007 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 TTLL5Q6EMB2 1281 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 RSBN1LQ6PCB5 846 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 C15orf52Q6ZUT6 534 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 ATG9AQ7Z3C6 839 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 KCNQ5Q9NR82 932 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 ADARB2Q9NS39 739 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 ZBTB40Q9NUA8 1239 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 CNOT7Q9UIV1 285 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 HDAC9Q9UKV0 1011 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 JAG2Q9Y219 1238 aa8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 SUPT16HQ9Y5B9 1047 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-221ENST00000625705 SCN9AQ15858 1988 aa8.9□□□□□ -0.99
NPLOC4-221ENST00000625705 F8W031 263 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 EPS15P42566 896 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 STRIP1Q5VSL9 837 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 LDHDQ86WU2 507 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 RPAP2Q8IXW5 612 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 VGLL2Q8N8G2 317 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 AGBL3Q8NEM8 1001 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 RBM46Q8TBY0 533 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 SSH3Q8TE77 659 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 CRBNQ96SW2 442 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 EXOC6BQ9Y2D4 811 aa8.89□□□□□ -0.99
NPLOC4-221ENST00000625705 ZNF609O15014 1411 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 ARAP2Q8WZ64 1704 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 A0A1B0GUL7 405 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 VIL1P09327 827 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 RBM5P52756 815 aaKnown RBP eCLIP8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 C1QTNF8P60827 252 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 FSTL1Q12841 308 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 KIF4BQ2VIQ3 1234 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 TBC1D10BQ4KMP7 808 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 TJAP1Q5JTD0 557 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 MFSD14BQ5SR56 506 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 USP50Q70EL3 339 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 KIAA0825Q8IV33 1275 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 DPF2Q92785 391 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 FAM84BQ96KN1 310 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 MXD3Q9BW11 206 aa8.88□□□□□ -0.99
NPLOC4-221ENST00000625705 POTECB2RU33 542 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 IL1R1P14778 569 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 FGFR2P21802 821 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 TIMM10P62072 90 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 TTC39AQ5SRH9 613 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 DACT2Q5SW24 774 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 TBC1D22AQ8WUA7 517 aa8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-221ENST00000625705 IRS2Q9Y4H2 1338 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 SHTN1A0MZ66 631 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 SEMA3EO15041 775 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 SASH1O94885 1247 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 ADORA1P30542 326 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 PHKA1P46020 1223 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 APLP1P51693 650 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 PTGDRQ13258 359 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 TNNI3KQ59H18 835 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 CCDC158Q5M9N0 1113 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 MAP1SQ66K74 1059 aaPredicted RBP8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 FBXO33Q7Z6M2 555 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 AACSQ86V21 672 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 CLASRPQ8N2M8 674 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 TDRD7Q8NHU6 1098 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 WDR66Q8TBY9 1149 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 TRPM4Q8TD43 1214 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 DCPSQ96C86 337 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 KIF1BPQ96EK5 621 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 XAGE2Q96GT9 111 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 MTRQ99707 1265 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 MYOZ2Q9NPC6 264 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 DENND2AQ9ULE3 1009 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 FPGT-TNNI3KV9GXZ4 949 aa8.86□□□□□ -0.99
NPLOC4-221ENST00000625705 MAST3O60307 1309 aa8.85□□□□□ -0.99
NPLOC4-221ENST00000625705 MYO1BO43795 1136 aa8.85□□□□□ -0.99
NPLOC4-221ENST00000625705 RAB11FIP3O75154 756 aa8.85□□□□□ -0.99
NPLOC4-221ENST00000625705 IFIT2P09913 472 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms