RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PPIL2Q13356 520 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 SNAPC2Q13487 334 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 SLC9C1Q4G0N8 1177 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 CDC42EP5Q6NZY7 148 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 C17orf99Q6UX52 265 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 SUGT1Q9Y2Z0 365 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 DAGLAQ9Y4D2 1042 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 PTPRCP08575 1304 aa13.87□□□□□ -0.19
DDX41-218ENST00000625286 TRIOBPQ9H2D6 2365 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 IFIT1P09914 478 aaKnown RBP13.86□□□□□ -0.19
DDX41-218ENST00000625286 SLURP2P0DP57 97 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 PRDX5P30044 214 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 TCP10Q12799 353 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.86□□□□□ -0.19
DDX41-218ENST00000625286 FAM151AQ8WW52 585 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 FAM198AQ9UFP1 575 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 CPA4Q9UI42 421 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 ADGRA2Q96PE1 1338 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 MYH13Q9UKX3 1938 aa13.86□□□□□ -0.19
DDX41-218ENST00000625286 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
DDX41-218ENST00000625286 PPATQ06203 517 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 LPIN2Q92539 896 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 GCC1Q96CN9 775 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
DDX41-218ENST00000625286 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
DDX41-218ENST00000625286 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.19
DDX41-218ENST00000625286 MTFR1Q15390 333 aa13.84□□□□□ -0.19
DDX41-218ENST00000625286 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
DDX41-218ENST00000625286 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
DDX41-218ENST00000625286 WDR66Q8TBY9 1149 aa13.84□□□□□ -0.19
DDX41-218ENST00000625286 SHISA4Q96DD7 197 aa13.84□□□□□ -0.19
DDX41-218ENST00000625286 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
DDX41-218ENST00000625286 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
DDX41-218ENST00000625286 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.19
DDX41-218ENST00000625286 PHF20L1A8MW92 1017 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 PDHXO00330 501 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 SLC5A1P13866 664 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 PHKA1P46020 1223 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 SLC4A8Q2Y0W8 1093 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 DCAF15Q66K64 600 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 SH3BP5LQ7L8J4 393 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 ANKRD23Q86SG2 305 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 SIL1Q9H173 461 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 MAST3O60307 1309 aa13.83□□□□□ -0.2
DDX41-218ENST00000625286 E9PSI1 815 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 H0YGN5 161 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 ADORA1P30542 326 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 PSMC4P43686 418 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
DDX41-218ENST00000625286 TRMT2AQ8IZ69 625 aaKnown RBP13.82□□□□□ -0.2
DDX41-218ENST00000625286 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 SRRDQ9UH36 339 aa13.82□□□□□ -0.2
DDX41-218ENST00000625286 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
DDX41-218ENST00000625286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.82□□□□□ -0.2
DDX41-218ENST00000625286 CYP2C8P10632 490 aa13.81□□□□□ -0.2
DDX41-218ENST00000625286 OSBPP22059 807 aa13.81□□□□□ -0.2
DDX41-218ENST00000625286 ATP2B3Q16720 1220 aa13.81□□□□□ -0.2
DDX41-218ENST00000625286 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
DDX41-218ENST00000625286 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
DDX41-218ENST00000625286 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 CIAO1O76071 339 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 GNRH1P01148 92 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 LDHBP07195 334 aaKnown RBP13.8□□□□□ -0.2
DDX41-218ENST00000625286 BCRP11274 1271 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 KIF22Q14807 665 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 UBE2Q1Q7Z7E8 422 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
DDX41-218ENST00000625286 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.8□□□□□ -0.2
DDX41-218ENST00000625286 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 RFX7Q2KHR2 1363 aa13.8□□□□□ -0.2
DDX41-218ENST00000625286 PHIPQ8WWQ0 1821 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 MGAMO43451 1857 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 DDTLA6NHG4 134 aaPredicted RBP13.79□□□□□ -0.2
DDX41-218ENST00000625286 RGS3P49796 1198 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 TIMM10P62072 90 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 MAP3K10Q02779 954 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 IDI2Q9BXS1 227 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
DDX41-218ENST00000625286 GABRQQ9UN88 632 aa13.79□□□□□ -0.2
DDX41-218ENST00000625286 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
DDX41-218ENST00000625286 CXCL11O14625 94 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 ZBTB22O15209 634 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
DDX41-218ENST00000625286 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
DDX41-218ENST00000625286 UBTFL1P0CB47 393 aaPredicted RBP13.78□□□□□ -0.2
DDX41-218ENST00000625286 PTPRAP18433 802 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 PRMT2P55345 433 aa13.78□□□□□ -0.2
DDX41-218ENST00000625286 PRKCZQ05513 592 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms