RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
CD99-211ENST00000623253 EYA2O00167 538 aa20.26■□□□□ 0.83
CD99-211ENST00000623253 FGFR2P21802 821 aa20.26■□□□□ 0.83
CD99-211ENST00000623253 INPP5BP32019 993 aa20.26■□□□□ 0.83
CD99-211ENST00000623253 PPATQ06203 517 aa20.26■□□□□ 0.83
CD99-211ENST00000623253 WDR66Q8TBY9 1149 aa20.26■□□□□ 0.83
CD99-211ENST00000623253 ZCCHC17Q9NP64 241 aaKnown RBP20.26■□□□□ 0.83
CD99-211ENST00000623253 RBBP6Q7Z6E9 1792 aaKnown RBP20.26■□□□□ 0.83
CD99-211ENST00000623253 KIF16BQ96L93 1317 aa20.26■□□□□ 0.83
CD99-211ENST00000623253 CENPFP49454 3210 aa20.25■□□□□ 0.83
CD99-211ENST00000623253 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
CD99-211ENST00000623253 LPIN2Q92539 896 aa20.25■□□□□ 0.83
CD99-211ENST00000623253 CPA4Q9UI42 421 aa20.25■□□□□ 0.83
CD99-211ENST00000623253 DIXDC1Q155Q3 683 aa20.24■□□□□ 0.83
CD99-211ENST00000623253 FAM151AQ8WW52 585 aa20.24■□□□□ 0.83
CD99-211ENST00000623253 PDHXO00330 501 aa20.23■□□□□ 0.83
CD99-211ENST00000623253 GNRH1P01148 92 aa20.23■□□□□ 0.83
CD99-211ENST00000623253 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
CD99-211ENST00000623253 SIL1Q9H173 461 aa20.23■□□□□ 0.83
CD99-211ENST00000623253 DAGLAQ9Y4D2 1042 aa20.23■□□□□ 0.83
CD99-211ENST00000623253 MKI67P46013 3256 aaKnown RBP20.23■□□□□ 0.83
CD99-211ENST00000623253 KIAA0100Q14667 2235 aaKnown RBP20.23■□□□□ 0.83
CD99-211ENST00000623253 ZNF521Q96K83 1311 aa20.23■□□□□ 0.83
CD99-211ENST00000623253 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
CD99-211ENST00000623253 PSMC4P43686 418 aa20.22■□□□□ 0.83
CD99-211ENST00000623253 RFX5P48382 616 aaPredicted RBP20.22■□□□□ 0.83
CD99-211ENST00000623253 PRMT2P55345 433 aa20.22■□□□□ 0.83
CD99-211ENST00000623253 USP40Q9NVE5 1235 aa20.22■□□□□ 0.83
CD99-211ENST00000623253 FMNL1O95466 1100 aaPredicted RBP20.21■□□□□ 0.83
CD99-211ENST00000623253 NFIAQ12857 509 aa20.21■□□□□ 0.83
CD99-211ENST00000623253 C17orf99Q6UX52 265 aa20.21■□□□□ 0.83
CD99-211ENST00000623253 ANKRD23Q86SG2 305 aa20.21■□□□□ 0.83
CD99-211ENST00000623253 GNL3LQ9NVN8 582 aaKnown RBP20.21■□□□□ 0.83
CD99-211ENST00000623253 E9PSI1 815 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 LDHBP07195 334 aaKnown RBP20.2■□□□□ 0.82
CD99-211ENST00000623253 HOXD10P28358 340 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 PRDX5P30044 214 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 ATG9AQ7Z3C6 839 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 CEP126Q9P2H0 1117 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 COLQQ9Y215 455 aaPredicted RBP20.2■□□□□ 0.82
CD99-211ENST00000623253 ZSWIM8A7E2V4 1837 aa20.2■□□□□ 0.82
CD99-211ENST00000623253 CTGFP29279 349 aa20.19■□□□□ 0.82
CD99-211ENST00000623253 MTFR1Q15390 333 aa20.19■□□□□ 0.82
CD99-211ENST00000623253 RAET1EQ8TD07 263 aa20.19■□□□□ 0.82
CD99-211ENST00000623253 TRIM47Q96LD4 638 aa20.19■□□□□ 0.82
CD99-211ENST00000623253 SRRDQ9UH36 339 aa20.19■□□□□ 0.82
CD99-211ENST00000623253 ZNF112Q9UJU3 913 aa20.19■□□□□ 0.82
CD99-211ENST00000623253 H0YGN5 161 aa20.18■□□□□ 0.82
CD99-211ENST00000623253 UBTFL1P0CB47 393 aaPredicted RBP20.18■□□□□ 0.82
CD99-211ENST00000623253 OSBPP22059 807 aa20.18■□□□□ 0.82
CD99-211ENST00000623253 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
CD99-211ENST00000623253 BIN2Q9UBW5 565 aaPredicted RBP20.18■□□□□ 0.82
CD99-211ENST00000623253 FAM198AQ9UFP1 575 aa20.18■□□□□ 0.82
CD99-211ENST00000623253 KCNH4Q9UQ05 1017 aa20.18■□□□□ 0.82
CD99-211ENST00000623253 BRCA2P51587 3418 aa20.18■□□□□ 0.82
CD99-211ENST00000623253 FXR1P51114 621 aaKnown RBP eCLIP20.17■□□□□ 0.82
CD99-211ENST00000623253 ZFPM1Q8IX07 1006 aa20.17■□□□□ 0.82
CD99-211ENST00000623253 CYP2C8P10632 490 aa20.16■□□□□ 0.82
CD99-211ENST00000623253 GRK4P32298 578 aa20.16■□□□□ 0.82
CD99-211ENST00000623253 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
CD99-211ENST00000623253 ZSCAN29Q8IWY8 852 aaPredicted RBP20.16■□□□□ 0.82
CD99-211ENST00000623253 DPF3Q92784 378 aa20.16■□□□□ 0.82
CD99-211ENST00000623253 PARK7Q99497 189 aaKnown RBP20.16■□□□□ 0.82
CD99-211ENST00000623253 DENND2AQ9ULE3 1009 aa20.16■□□□□ 0.82
CD99-211ENST00000623253 MYPNQ86TC9 1320 aa20.16■□□□□ 0.82
CD99-211ENST00000623253 CIAO1O76071 339 aa20.15■□□□□ 0.82
CD99-211ENST00000623253 PHKA1P46020 1223 aa20.15■□□□□ 0.82
CD99-211ENST00000623253 MOGSQ13724 837 aa20.15■□□□□ 0.82
CD99-211ENST00000623253 ALDH1L2Q3SY69 923 aa20.15■□□□□ 0.82
CD99-211ENST00000623253 PICK1Q9NRD5 415 aa20.15■□□□□ 0.82
CD99-211ENST00000623253 ADGRA2Q96PE1 1338 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 CXCL11O14625 94 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 RGS3P49796 1198 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 SLFN5Q08AF3 891 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 FBXO3Q9UK99 471 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 ZHX2Q9Y6X8 837 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 AK9Q5TCS8 1911 aa20.14■□□□□ 0.81
CD99-211ENST00000623253 SEMA3EO15041 775 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 CCL5P13501 91 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
CD99-211ENST00000623253 FCGRTP55899 365 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 PRKCZQ05513 592 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 GPAT2Q6NUI2 795 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 DZIP1Q86YF9 867 aaKnown RBP20.13■□□□□ 0.81
CD99-211ENST00000623253 NKX2-3Q8TAU0 364 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 RNF208Q9H0X6 261 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 ABCF2Q9UG63 623 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
CD99-211ENST00000623253 LRRFIP2Q9Y608 721 aaKnown RBP20.13■□□□□ 0.81
CD99-211ENST00000623253 MYH13Q9UKX3 1938 aa20.13■□□□□ 0.81
CD99-211ENST00000623253 SALL1Q9NSC2 1324 aa20.12■□□□□ 0.81
CD99-211ENST00000623253 ADORA1P30542 326 aa20.12■□□□□ 0.81
CD99-211ENST00000623253 UBXN2AP68543 259 aa20.12■□□□□ 0.81
CD99-211ENST00000623253 CCDC102BQ68D86 513 aa20.12■□□□□ 0.81
CD99-211ENST00000623253 GADL1Q6ZQY3 521 aa20.12■□□□□ 0.81
CD99-211ENST00000623253 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
CD99-211ENST00000623253 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms