RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 FBXO3Q9UK99 471 aa29.69■■■□□ 2.34
CPSF1-214ENST00000622776 BTBD19C9JJ37 291 aa29.68■■■□□ 2.34
CPSF1-214ENST00000622776 UBTFL1P0CB47 393 aaPredicted RBP29.68■■■□□ 2.34
CPSF1-214ENST00000622776 FAM151AQ8WW52 585 aa29.68■■■□□ 2.34
CPSF1-214ENST00000622776 SIL1Q9H173 461 aa29.68■■■□□ 2.34
CPSF1-214ENST00000622776 DAGLAQ9Y4D2 1042 aa29.68■■■□□ 2.34
CPSF1-214ENST00000622776 TLR2O60603 784 aa29.67■■■□□ 2.34
CPSF1-214ENST00000622776 DIXDC1Q155Q3 683 aa29.67■■■□□ 2.34
CPSF1-214ENST00000622776 ATP2B3Q16720 1220 aa29.67■■■□□ 2.34
CPSF1-214ENST00000622776 CEP126Q9P2H0 1117 aa29.67■■■□□ 2.34
CPSF1-214ENST00000622776 PTCH2Q9Y6C5 1203 aa29.67■■■□□ 2.34
CPSF1-214ENST00000622776 MYH13Q9UKX3 1938 aa29.67■■■□□ 2.34
CPSF1-214ENST00000622776 CIAO1O76071 339 aa29.66■■■□□ 2.34
CPSF1-214ENST00000622776 EN2P19622 333 aaPredicted RBP29.66■■■□□ 2.34
CPSF1-214ENST00000622776 PRDX5P30044 214 aa29.66■■■□□ 2.34
CPSF1-214ENST00000622776 INPP5BP32019 993 aa29.66■■■□□ 2.34
CPSF1-214ENST00000622776 CDC42EP5Q6NZY7 148 aa29.66■■■□□ 2.34
CPSF1-214ENST00000622776 ZNF333Q96JL9 665 aa29.66■■■□□ 2.34
CPSF1-214ENST00000622776 RBBP6Q7Z6E9 1792 aaKnown RBP29.65■■■□□ 2.34
CPSF1-214ENST00000622776 PPATQ06203 517 aa29.65■■■□□ 2.34
CPSF1-214ENST00000622776 TRMT2AQ8IZ69 625 aaKnown RBP29.65■■■□□ 2.34
CPSF1-214ENST00000622776 TMEM106CQ9BVX2 250 aa29.65■■■□□ 2.34
CPSF1-214ENST00000622776 GNL3LQ9NVN8 582 aaKnown RBP29.65■■■□□ 2.34
CPSF1-214ENST00000622776 TCP10Q12799 353 aa29.64■■■□□ 2.34
CPSF1-214ENST00000622776 SLC9C1Q4G0N8 1177 aa29.64■■■□□ 2.34
CPSF1-214ENST00000622776 NBPF11Q86T75 865 aa29.64■■■□□ 2.34
CPSF1-214ENST00000622776 LDHBP07195 334 aaKnown RBP29.63■■■□□ 2.33
CPSF1-214ENST00000622776 NFIAQ12857 509 aa29.63■■■□□ 2.33
CPSF1-214ENST00000622776 ZNF112Q9UJU3 913 aa29.63■■■□□ 2.33
CPSF1-214ENST00000622776 NOB1Q9ULX3 412 aaKnown RBP29.63■■■□□ 2.33
CPSF1-214ENST00000622776 LACTBP83111 547 aaPredicted RBP29.62■■■□□ 2.33
CPSF1-214ENST00000622776 KIF22Q14807 665 aa29.62■■■□□ 2.33
CPSF1-214ENST00000622776 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.62■■■□□ 2.33
CPSF1-214ENST00000622776 GCC1Q96CN9 775 aa29.62■■■□□ 2.33
CPSF1-214ENST00000622776 ARHGAP39Q9C0H5 1083 aa29.62■■■□□ 2.33
CPSF1-214ENST00000622776 CT47B1P0C2W7 299 aaPredicted RBP29.61■■■□□ 2.33
CPSF1-214ENST00000622776 PHKA1P46020 1223 aa29.61■■■□□ 2.33
CPSF1-214ENST00000622776 USP40Q9NVE5 1235 aa29.61■■■□□ 2.33
CPSF1-214ENST00000622776 DENND2AQ9ULE3 1009 aa29.61■■■□□ 2.33
CPSF1-214ENST00000622776 LRRFIP2Q9Y608 721 aaKnown RBP29.61■■■□□ 2.33
CPSF1-214ENST00000622776 SALL1Q9NSC2 1324 aa29.61■■■□□ 2.33
CPSF1-214ENST00000622776 AK9Q5TCS8 1911 aa29.61■■■□□ 2.33
CPSF1-214ENST00000622776 CEP290O15078 2479 aa29.6■■■□□ 2.33
CPSF1-214ENST00000622776 SEMA3EO15041 775 aa29.6■■■□□ 2.33
CPSF1-214ENST00000622776 IL15P40933 162 aaPredicted RBP29.6■■■□□ 2.33
CPSF1-214ENST00000622776 API5Q9BZZ5 524 aaKnown RBP29.6■■■□□ 2.33
CPSF1-214ENST00000622776 FAM198AQ9UFP1 575 aa29.6■■■□□ 2.33
CPSF1-214ENST00000622776 PA2G4Q9UQ80 394 aaKnown RBP29.6■■■□□ 2.33
CPSF1-214ENST00000622776 HDAC5Q9UQL6 1122 aa29.6■■■□□ 2.33
CPSF1-214ENST00000622776 BRCA2P51587 3418 aa29.6■■■□□ 2.33
CPSF1-214ENST00000622776 KCNH4Q9UQ05 1017 aa29.59■■■□□ 2.33
CPSF1-214ENST00000622776 ANKRD23Q86SG2 305 aa29.58■■■□□ 2.33
CPSF1-214ENST00000622776 GNRH1P01148 92 aa29.57■■■□□ 2.32
CPSF1-214ENST00000622776 SLC4A8Q2Y0W8 1093 aa29.57■■■□□ 2.32
CPSF1-214ENST00000622776 NOL9Q5SY16 702 aaKnown RBP29.57■■■□□ 2.32
CPSF1-214ENST00000622776 C17orf99Q6UX52 265 aa29.57■■■□□ 2.32
CPSF1-214ENST00000622776 COPRSQ9NQ92 184 aa29.57■■■□□ 2.32
CPSF1-214ENST00000622776 ZBTB22O15209 634 aa29.56■■■□□ 2.32
CPSF1-214ENST00000622776 ADORA1P30542 326 aa29.56■■■□□ 2.32
CPSF1-214ENST00000622776 ZFPM1Q8IX07 1006 aa29.56■■■□□ 2.32
CPSF1-214ENST00000622776 CPA4Q9UI42 421 aa29.56■■■□□ 2.32
CPSF1-214ENST00000622776 ZSWIM8A7E2V4 1837 aa29.55■■■□□ 2.32
CPSF1-214ENST00000622776 PDHXO00330 501 aa29.55■■■□□ 2.32
CPSF1-214ENST00000622776 PRMT2P55345 433 aa29.55■■■□□ 2.32
CPSF1-214ENST00000622776 CCDC102BQ68D86 513 aa29.55■■■□□ 2.32
CPSF1-214ENST00000622776 SH3TC2Q8TF17 1288 aa29.55■■■□□ 2.32
CPSF1-214ENST00000622776 MEIS3Q99687 375 aa29.55■■■□□ 2.32
CPSF1-214ENST00000622776 MYCP01106 439 aaPredicted RBP29.54■■■□□ 2.32
CPSF1-214ENST00000622776 MOGSQ13724 837 aa29.54■■■□□ 2.32
CPSF1-214ENST00000622776 ZGPATQ8N5A5 531 aaKnown RBP29.54■■■□□ 2.32
CPSF1-214ENST00000622776 IDI2Q9BXS1 227 aa29.53■■■□□ 2.32
CPSF1-214ENST00000622776 GAKO14976 1311 aa29.52■■■□□ 2.32
CPSF1-214ENST00000622776 ADGRA2Q96PE1 1338 aa29.52■■■□□ 2.32
CPSF1-214ENST00000622776 ECM2O94769 699 aaPredicted RBP29.52■■■□□ 2.32
CPSF1-214ENST00000622776 RGS3P49796 1198 aa29.52■■■□□ 2.32
CPSF1-214ENST00000622776 TIMM10P62072 90 aa29.52■■■□□ 2.32
CPSF1-214ENST00000622776 ENTPD3O75355 529 aa29.51■■■□□ 2.31
CPSF1-214ENST00000622776 CTGFP29279 349 aa29.51■■■□□ 2.31
CPSF1-214ENST00000622776 PSMC4P43686 418 aa29.51■■■□□ 2.31
CPSF1-214ENST00000622776 RASGRF1Q13972 1273 aa29.51■■■□□ 2.31
CPSF1-214ENST00000622776 MYH2Q9UKX2 1941 aa29.51■■■□□ 2.31
CPSF1-214ENST00000622776 ATRNL1Q5VV63 1379 aa29.51■■■□□ 2.31
CPSF1-214ENST00000622776 CXCL11O14625 94 aa29.5■■■□□ 2.31
CPSF1-214ENST00000622776 HABP4Q5JVS0 413 aaKnown RBP29.5■■■□□ 2.31
CPSF1-214ENST00000622776 TRIM47Q96LD4 638 aa29.5■■■□□ 2.31
CPSF1-214ENST00000622776 SRRDQ9UH36 339 aa29.5■■■□□ 2.31
CPSF1-214ENST00000622776 PHF20L1A8MW92 1017 aa29.49■■■□□ 2.31
CPSF1-214ENST00000622776 RARSP54136 660 aaKnown RBP29.49■■■□□ 2.31
CPSF1-214ENST00000622776 DZIP1Q86YF9 867 aaKnown RBP29.49■■■□□ 2.31
CPSF1-214ENST00000622776 ABCF2Q9UG63 623 aa29.49■■■□□ 2.31
CPSF1-214ENST00000622776 PDS5AQ29RF7 1337 aaKnown RBP29.48■■■□□ 2.31
CPSF1-214ENST00000622776 HOXD10P28358 340 aa29.48■■■□□ 2.31
CPSF1-214ENST00000622776 GPAT2Q6NUI2 795 aa29.48■■■□□ 2.31
CPSF1-214ENST00000622776 SH3BP5LQ7L8J4 393 aa29.48■■■□□ 2.31
CPSF1-214ENST00000622776 SLF2Q8IX21 1173 aa29.48■■■□□ 2.31
CPSF1-214ENST00000622776 FAM163AQ96GL9 167 aaPredicted RBP29.48■■■□□ 2.31
CPSF1-214ENST00000622776 FMNL1O95466 1100 aaPredicted RBP29.47■■■□□ 2.31
CPSF1-214ENST00000622776 OSBPP22059 807 aa29.47■■■□□ 2.31
CPSF1-214ENST00000622776 SPTY2D1Q68D10 685 aaPredicted RBP29.47■■■□□ 2.31
CPSF1-214ENST00000622776 ZSCAN29Q8IWY8 852 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms