RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ABCA8O94911 1581 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 ZNF532Q9HCE3 1301 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 STAMQ92783 540 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 CCDC42Q96M95 316 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 GBP2P32456 591 aaPredicted RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 GPIHBP1Q8IV16 184 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 CMTR1Q8N1G2 835 aaKnown RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 LETM2Q2VYF4 491 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 SRRTQ9BXP5 876 aaKnown RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 AKR1B15C9JRZ8 316 aaPredicted RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 RILPL1Q5EBL4 403 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 TTLL7Q6ZT98 887 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 CEP112Q8N8E3 955 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 RRP36Q96EU6 259 aaKnown RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 LRRC27Q9C0I9 530 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 CKAP4Q07065 602 aaKnown RBP18.29■□□□□ 0.52
GABRB3-215ENST00000622697 KIF5AQ12840 1032 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 IGSF22Q8N9C0 903 aa18.29■□□□□ 0.52
GABRB3-215ENST00000622697 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
GABRB3-215ENST00000622697 DEXIO95424 95 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 LRMPQ12912 555 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 EVCP57679 992 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 CETN1Q12798 172 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 TPTE2Q6XPS3 522 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 LDHBP07195 334 aaKnown RBP18.28■□□□□ 0.52
GABRB3-215ENST00000622697 TRMT44Q8IYL2 757 aaKnown RBP18.28■□□□□ 0.52
GABRB3-215ENST00000622697 USP28Q96RU2 1077 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 MYRIPQ8NFW9 859 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 LUC7L2Q9Y383 392 aaKnown RBP18.28■□□□□ 0.52
GABRB3-215ENST00000622697 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 PDE8AO60658 829 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 CETN2P41208 172 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 LRRC24Q50LG9 513 aa18.28■□□□□ 0.52
GABRB3-215ENST00000622697 ELF2Q15723 593 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 TTC6Q86TZ1 520 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 PAF1Q8N7H5 531 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 HSF2BPO75031 334 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 TACC1O75410 805 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 WDR78Q5VTH9 848 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 RSPH14Q9UHP6 348 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 KDRP35968 1356 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 KRT86O43790 486 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 KRT79Q5XKE5 535 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 VPS18Q9P253 973 aa18.27■□□□□ 0.52
GABRB3-215ENST00000622697 PNOCQ13519 176 aa18.27■□□□□ 0.51
GABRB3-215ENST00000622697 ERCC3P19447 782 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 MYOM2P54296 1465 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 PPP1R9BQ96SB3 815 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 ATP2C2O75185 946 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 EIF6P56537 245 aaKnown RBP18.26■□□□□ 0.51
GABRB3-215ENST00000622697 NLRP12P59046 1061 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 KRT83P78385 493 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.51
GABRB3-215ENST00000622697 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 ERMNQ8TAM6 284 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 CARD6Q9BX69 1037 aa18.26■□□□□ 0.51
GABRB3-215ENST00000622697 ZNF853P0CG23 659 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 DNAJC21Q5F1R6 531 aaKnown RBP18.25■□□□□ 0.51
GABRB3-215ENST00000622697 EHMT1Q9H9B1 1298 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
GABRB3-215ENST00000622697 NFE2L3Q9Y4A8 694 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 TIGD1Q96MW7 591 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 SCLT1Q96NL6 688 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 PPP2R3AQ06190 1150 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
GABRB3-215ENST00000622697 RGS12O14924 1447 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 CCDC122Q5T0U0 273 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 ERO1AQ96HE7 468 aa18.25■□□□□ 0.51
GABRB3-215ENST00000622697 CUTAO60888 179 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 HSPD1P10809 573 aaKnown RBP18.24■□□□□ 0.51
GABRB3-215ENST00000622697 CAPN2P17655 700 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 STAP2Q9UGK3 403 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 TUBB4AP04350 444 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 ADD1P35611 737 aaKnown RBP18.24■□□□□ 0.51
GABRB3-215ENST00000622697 OGFRQ9NZT2 677 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 MTX1Q13505 466 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 CNGA4Q8IV77 575 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 NYXQ9GZU5 481 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 VPS54Q9P1Q0 977 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 PHKG2P15735 406 aa18.24■□□□□ 0.51
GABRB3-215ENST00000622697 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
GABRB3-215ENST00000622697 LPIN2Q92539 896 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms