RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 MPNDQ8N594 471 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 LPIN2Q92539 896 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 BRF1Q92994 677 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 GGA1Q9UJY5 639 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 R3HCC1Q9Y3T6 440 aaKnown RBP20.49■□□□□ 0.87
FAM3A-222ENST00000621967 UFL1O94874 794 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 SLC5A1P13866 664 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 SCRN1Q12765 414 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 UBE4AQ14139 1066 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 C7orf43Q8WVR3 580 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 LEMD3Q9Y2U8 911 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 ZNF804BA4D1E1 1349 aa20.48■□□□□ 0.87
FAM3A-222ENST00000621967 SNAP23O00161 211 aa20.47■□□□□ 0.87
FAM3A-222ENST00000621967 IFIT1P09914 478 aaKnown RBP20.47■□□□□ 0.87
FAM3A-222ENST00000621967 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
FAM3A-222ENST00000621967 ZSCAN16Q9H4T2 348 aaPredicted RBP20.47■□□□□ 0.87
FAM3A-222ENST00000621967 DDX19AQ9NUU7 478 aaKnown RBP20.47■□□□□ 0.87
FAM3A-222ENST00000621967 AP5Z1O43299 807 aa20.47■□□□□ 0.87
FAM3A-222ENST00000621967 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
FAM3A-222ENST00000621967 MAST3O60307 1309 aa20.47■□□□□ 0.87
FAM3A-222ENST00000621967 AKAP11Q9UKA4 1901 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 C6orf229H3BNL8 230 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 FGFR2P21802 821 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 GORABQ5T7V8 394 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 FAM200AQ8TCP9 573 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 PIBF1Q8WXW3 757 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 TFIP11Q9UBB9 837 aaKnown RBP20.46■□□□□ 0.87
FAM3A-222ENST00000621967 LTBP1Q14766 1721 aa20.46■□□□□ 0.87
FAM3A-222ENST00000621967 RNF113AO15541 343 aaKnown RBP20.45■□□□□ 0.86
FAM3A-222ENST00000621967 HSPD1P10809 573 aaKnown RBP20.45■□□□□ 0.86
FAM3A-222ENST00000621967 RTKN2Q8IZC4 609 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 NSUN7Q8NE18 718 aaKnown RBP20.45■□□□□ 0.86
FAM3A-222ENST00000621967 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 DACT1Q9NYF0 836 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 TYRO3Q06418 890 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 XAGE2Q96GT9 111 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 PGBD1Q96JS3 809 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 LRRC2Q9BYS8 371 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 CLSTN2Q9H4D0 955 aa20.45■□□□□ 0.86
FAM3A-222ENST00000621967 GOLGA6L4A6NEF3 574 aa20.44■□□□□ 0.86
FAM3A-222ENST00000621967 WTIPA6NIX2 430 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-222ENST00000621967 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-222ENST00000621967 POLLQ9UGP5 575 aa20.44■□□□□ 0.86
FAM3A-222ENST00000621967 ARAP2Q8WZ64 1704 aa20.44■□□□□ 0.86
FAM3A-222ENST00000621967 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 SALL1Q9NSC2 1324 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 E7EWF7 191 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 CTDNEP1O95476 244 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 ADORA1P30542 326 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 HMGN5P82970 282 aaKnown RBP20.43■□□□□ 0.86
FAM3A-222ENST00000621967 FBXL16Q8N461 479 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 TNMDQ9H2S6 317 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 H3BQV1 296 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
FAM3A-222ENST00000621967 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 SASS6Q6UVJ0 657 aa20.43■□□□□ 0.86
FAM3A-222ENST00000621967 SNED1Q8TER0 1413 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 FGD1P98174 961 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 CAVIN4Q5BKX8 364 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 VPS37DQ86XT2 251 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 DDX11Q96FC9 970 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 GPR101Q96P66 508 aaPredicted RBP20.42■□□□□ 0.86
FAM3A-222ENST00000621967 EYA3Q99504 573 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 CFAP45Q9UL16 551 aa20.42■□□□□ 0.86
FAM3A-222ENST00000621967 KLRK1P26718 216 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 ADD1P35611 737 aaKnown RBP20.41■□□□□ 0.86
FAM3A-222ENST00000621967 APOBRQ0VD83 1088 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 CAMK4Q16566 473 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 CCDC158Q5M9N0 1113 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 SUPT20HQ8NEM7 779 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 ZNF830Q96NB3 372 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-222ENST00000621967 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-222ENST00000621967 MYO5AQ9Y4I1 1855 aaKnown RBP20.41■□□□□ 0.86
FAM3A-222ENST00000621967 PTPDC1A2A3K4 754 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 M0R2C6 588 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 TPM3P06753 285 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 ZNF274Q96GC6 653 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-222ENST00000621967 SPTLC3Q9NUV7 552 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
FAM3A-222ENST00000621967 NR1I2O75469 434 aa20.4■□□□□ 0.86
FAM3A-222ENST00000621967 GYG1P46976 350 aa20.4■□□□□ 0.86
FAM3A-222ENST00000621967 EVCP57679 992 aa20.4■□□□□ 0.86
FAM3A-222ENST00000621967 TTC39AQ5SRH9 613 aa20.4■□□□□ 0.86
FAM3A-222ENST00000621967 RTFDC1Q9BY42 306 aaPredicted RBP20.4■□□□□ 0.86
FAM3A-222ENST00000621967 ZC3H12CQ9C0D7 883 aaKnown RBP20.4■□□□□ 0.86
FAM3A-222ENST00000621967 NOLC1Q14978 699 aaKnown RBP eCLIP20.39■□□□□ 0.86
FAM3A-222ENST00000621967 WASHC4Q2M389 1173 aa20.39■□□□□ 0.86
FAM3A-222ENST00000621967 LRRFIP1Q32MZ4 808 aaKnown RBP20.39■□□□□ 0.86
FAM3A-222ENST00000621967 OSBP2Q969R2 916 aa20.39■□□□□ 0.86
FAM3A-222ENST00000621967 PSMD1Q99460 953 aa20.39■□□□□ 0.86
FAM3A-222ENST00000621967 UTRNP46939 3433 aa20.39■□□□□ 0.85
FAM3A-222ENST00000621967 UQCRHLA0A096LP55 91 aa20.39■□□□□ 0.85
FAM3A-222ENST00000621967 RIMBP2O15034 1052 aa20.39■□□□□ 0.85
FAM3A-222ENST00000621967 UQCRHP07919 91 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms