RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
COL8A1-208ENST00000621757 OTOFQ9HC10 1997 aa14.73□□□□□ -0.05
COL8A1-208ENST00000621757 MROH7-TTC4A0A0A0MT08 1334 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
COL8A1-208ENST00000621757 CYP2E1P05181 493 aaPredicted RBP14.72□□□□□ -0.05
COL8A1-208ENST00000621757 ZAP70P43403 619 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 TTLL12Q14166 644 aaPredicted RBP14.72□□□□□ -0.05
COL8A1-208ENST00000621757 CDC42EP5Q6NZY7 148 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 TMEM39BQ9GZU3 492 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 DCTPP1Q9H773 170 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 RAI14Q9P0K7 980 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 RFX7Q2KHR2 1363 aa14.72□□□□□ -0.05
COL8A1-208ENST00000621757 HSPA8P11142 646 aaKnown RBP14.71□□□□□ -0.05
COL8A1-208ENST00000621757 ECE1P42892 770 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 TNNI2P48788 182 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 PRKG1Q13976 671 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 NBPF12Q5TAG4 269 aaPredicted RBP14.71□□□□□ -0.05
COL8A1-208ENST00000621757 SLF2Q8IX21 1173 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 NSUN4Q96CB9 384 aaKnown RBP14.71□□□□□ -0.05
COL8A1-208ENST00000621757 TEPSINQ96N21 525 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 PIH1D3Q9NQM4 214 aaKnown RBP14.71□□□□□ -0.05
COL8A1-208ENST00000621757 LRP2BPQ9P2M1 347 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
COL8A1-208ENST00000621757 RPAP1Q9BWH6 1393 aaPredicted RBP14.71□□□□□ -0.06
COL8A1-208ENST00000621757 BTDP43251 543 aa14.7□□□□□ -0.06
COL8A1-208ENST00000621757 NFIAQ12857 509 aa14.7□□□□□ -0.06
COL8A1-208ENST00000621757 RGMBQ6NW40 437 aa14.7□□□□□ -0.06
COL8A1-208ENST00000621757 EXOC6Q8TAG9 804 aa14.7□□□□□ -0.06
COL8A1-208ENST00000621757 UBE2Q2LH0YL09 131 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 AOC2O75106 756 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 ZNF157P51786 506 aaPredicted RBP14.69□□□□□ -0.06
COL8A1-208ENST00000621757 GSTO1P78417 241 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 SUPT20HL1Q3ZLR7 823 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 FKBP1CQ5VVH2 108 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 FAM83AQ86UY5 434 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 FAM163AQ96GL9 167 aaPredicted RBP14.69□□□□□ -0.06
COL8A1-208ENST00000621757 USP40Q9NVE5 1235 aa14.69□□□□□ -0.06
COL8A1-208ENST00000621757 ANGEL1Q9UNK9 670 aaKnown RBP14.69□□□□□ -0.06
COL8A1-208ENST00000621757 GPR75-ASB3A0A0A6YYF3 556 aa14.68□□□□□ -0.06
COL8A1-208ENST00000621757 FAM155AB1AL88 458 aaPredicted RBP14.68□□□□□ -0.06
COL8A1-208ENST00000621757 SLC10A3P09131 477 aa14.68□□□□□ -0.06
COL8A1-208ENST00000621757 MAP2K1Q02750 393 aaPredicted RBP14.68□□□□□ -0.06
COL8A1-208ENST00000621757 ARMC9Q7Z3E5 817 aa14.68□□□□□ -0.06
COL8A1-208ENST00000621757 RASAL3Q86YV0 1011 aa14.68□□□□□ -0.06
COL8A1-208ENST00000621757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL8A1-208ENST00000621757 ANTXR1Q9H6X2 564 aa14.68□□□□□ -0.06
COL8A1-208ENST00000621757 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
COL8A1-208ENST00000621757 IDH1O75874 414 aaKnown RBP14.67□□□□□ -0.06
COL8A1-208ENST00000621757 TCP10Q12799 353 aa14.67□□□□□ -0.06
COL8A1-208ENST00000621757 HDAC1Q13547 482 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-208ENST00000621757 AAMPQ13685 434 aa14.67□□□□□ -0.06
COL8A1-208ENST00000621757 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-208ENST00000621757 ADGRA1Q86SQ6 560 aa14.67□□□□□ -0.06
COL8A1-208ENST00000621757 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
COL8A1-208ENST00000621757 CDK5RAP2Q96SN8 1893 aa14.67□□□□□ -0.06
COL8A1-208ENST00000621757 PPP1R12BO60237 982 aaPredicted RBP14.66□□□□□ -0.06
COL8A1-208ENST00000621757 WDHD1O75717 1129 aaPredicted RBP14.66□□□□□ -0.06
COL8A1-208ENST00000621757 LDHCP07864 332 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 RGS3P49796 1198 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 RHBDL3P58872 404 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
COL8A1-208ENST00000621757 NOGQ13253 232 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 CCDC102AQ96A19 550 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 ZIC5Q96T25 663 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 IDI2Q9BXS1 227 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 FOCADQ5VW36 1801 aa14.66□□□□□ -0.06
COL8A1-208ENST00000621757 GOLIM4O00461 696 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 IGSF3O75054 1194 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 ATP5JP18859 108 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 MAP2K2P36507 400 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 IREB2P48200 963 aaKnown RBP14.65□□□□□ -0.06
COL8A1-208ENST00000621757 PICALMQ13492 652 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 LDLRAD1Q5T700 205 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 EDC3Q96F86 508 aaKnown RBP14.65□□□□□ -0.06
COL8A1-208ENST00000621757 BOLA2Q9H3K6 86 aa14.65□□□□□ -0.06
COL8A1-208ENST00000621757 DDX4Q9NQI0 724 aaKnown RBP14.65□□□□□ -0.06
COL8A1-208ENST00000621757 AATFQ9NY61 560 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL8A1-208ENST00000621757 USP2O75604 605 aaPredicted RBP14.64□□□□□ -0.07
COL8A1-208ENST00000621757 CYP7A1P22680 504 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 MAP3K12Q12852 859 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 TTF1Q15361 905 aaPredicted RBP14.64□□□□□ -0.07
COL8A1-208ENST00000621757 TSHZ3Q63HK5 1081 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 ZFPM1Q8IX07 1006 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 MAGEB6Q8N7X4 407 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 SH3RF3Q8TEJ3 882 aaPredicted RBP14.64□□□□□ -0.07
COL8A1-208ENST00000621757 ABHD8Q96I13 439 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 CLMNQ96JQ2 1002 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 NOL10Q9BSC4 688 aaKnown RBP14.64□□□□□ -0.07
COL8A1-208ENST00000621757 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 LAMB1P07942 1786 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 MYH7P12883 1935 aa14.64□□□□□ -0.07
COL8A1-208ENST00000621757 ATRNL1Q5VV63 1379 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 ENTPD3O75355 529 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 TEX11Q8IYF3 940 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
COL8A1-208ENST00000621757 HOOK2Q96ED9 719 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms