RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 LIG3P49916 1009 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 TRIM27P14373 513 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 ATP5DP30049 168 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 RAB3GAP1Q15042 981 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 EAPPQ56P03 285 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-210ENST00000621266 CCDC62Q6P9F0 684 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 EVI5LQ96CN4 794 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 NIP7Q9Y221 180 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL4A6-210ENST00000621266 TUBBP07437 444 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 CALCOCO2Q13137 446 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 SH2D4BQ5SQS7 431 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 STXBP4Q6ZWJ1 553 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-210ENST00000621266 SPAG1Q07617 926 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 TBC1D31Q96DN5 1066 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 SPATS2LQ9NUQ6 558 aaKnown RBP11.11□□□□□ -0.63
COL4A6-210ENST00000621266 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
COL4A6-210ENST00000621266 PICALMQ13492 652 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 C8orf74Q6P047 294 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 LCA5Q86VQ0 697 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 MCM7P33993 719 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 TSGA10Q9BZW7 698 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
COL4A6-210ENST00000621266 PPANQ9NQ55 473 aaKnown RBP11.1□□□□□ -0.63
COL4A6-210ENST00000621266 MBIPQ9NS73 344 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 FAF1Q9UNN5 650 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-210ENST00000621266 TBCAO75347 108 aaKnown RBP11.1□□□□□ -0.63
COL4A6-210ENST00000621266 RBBP5Q15291 538 aaKnown RBP11.1□□□□□ -0.63
COL4A6-210ENST00000621266 ATP6V0A2Q9Y487 856 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 BICDL2A1A5D9 508 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 SMIM24O75264 130 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 MAP3K12Q12852 859 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 RALGAPBQ86X10 1494 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 SH3BP5O60239 455 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 ERCC6LQ2NKX8 1250 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 BRF1Q92994 677 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 PIK3R4Q99570 1358 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 TRAPPC8Q9Y2L5 1435 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 ABCC10Q5T3U5 1492 aa11.1□□□□□ -0.63
COL4A6-210ENST00000621266 PSMA7O14818 248 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 ANXA1P04083 346 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 SESN3P58005 492 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 DACT3Q96B18 629 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 PFDN4Q9NQP4 134 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 FAM169AQ9Y6X4 670 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 KCNA6P17658 529 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 PLS1Q14651 629 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 TACC3Q9Y6A5 838 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 TRAPPC3LQ5T215 181 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 CCDC65Q8IXS2 484 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 GDAP1L1Q96MZ0 367 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 TRIM31Q9BZY9 425 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 FAM83GA6ND36 823 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 STMN1P16949 149 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 ASIC1P78348 528 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 MGARPQ8TDB4 240 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 JAG2Q9Y219 1238 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 RLBP1P12271 317 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 CCT6AP40227 531 aaKnown RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-210ENST00000621266 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 GEN1Q17RS7 908 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 LONRF3Q496Y0 759 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 JDP2Q8WYK2 163 aa11.09□□□□□ -0.63
COL4A6-210ENST00000621266 CDC5LQ99459 802 aaKnown RBP11.08□□□□□ -0.64
COL4A6-210ENST00000621266 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 BAG6P46379 1132 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
COL4A6-210ENST00000621266 KIAA0556O60303 1618 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 PPP2R5AQ15172 486 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 DBN1Q16643 649 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 PPP1R21Q6ZMI0 780 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 RNF41Q9H4P4 317 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-210ENST00000621266 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
COL4A6-210ENST00000621266 PLEKHA4Q9H4M7 779 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
COL4A6-210ENST00000621266 CLUL1Q15846 466 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 SEL1L2Q5TEA6 688 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 RASIP1Q5U651 963 aa11.08□□□□□ -0.64
COL4A6-210ENST00000621266 PRAG1Q86YV5 1406 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 SPECC1L-ADORA2AF8WAN1 911 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 GNGT1P63211 74 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 DPH6Q7L8W6 267 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
COL4A6-210ENST00000621266 FRMD4BQ9Y2L6 1034 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms