RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 PMFBP1Q8TBY8 1022 aa10.69□□□□□ -0.7
CBWD1-228ENST00000619157 KRTAP9-9Q9BYP9 154 aa10.69□□□□□ -0.7
CBWD1-228ENST00000619157 KRTAP9-4Q9BYQ2 154 aa10.69□□□□□ -0.7
CBWD1-228ENST00000619157 MAFBQ9Y5Q3 323 aaPredicted RBP10.69□□□□□ -0.7
CBWD1-228ENST00000619157 SPATA31A3Q5VYP0 1347 aa10.68□□□□□ -0.7
CBWD1-228ENST00000619157 DPYDQ12882 1025 aa10.68□□□□□ -0.7
CBWD1-228ENST00000619157 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
CBWD1-228ENST00000619157 TOPAZ1Q8N9V7 1692 aa10.68□□□□□ -0.7
CBWD1-228ENST00000619157 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
CBWD1-228ENST00000619157 DLL1O00548 723 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 FSTP19883 344 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 LARP1Q6PKG0 1096 aaKnown RBP10.67□□□□□ -0.7
CBWD1-228ENST00000619157 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 CDK19Q9BWU1 502 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 AKTIPQ9H8T0 292 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 GOLGA2P5Q9HBQ8 144 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
CBWD1-228ENST00000619157 QRICH2Q9H0J4 1663 aa10.66□□□□□ -0.7
CBWD1-228ENST00000619157 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
CBWD1-228ENST00000619157 TONSLQ96HA7 1378 aa10.66□□□□□ -0.7
CBWD1-228ENST00000619157 CENPJQ9HC77 1338 aaPredicted RBP10.66□□□□□ -0.7
CBWD1-228ENST00000619157 IGFBP4P22692 258 aa10.66□□□□□ -0.7
CBWD1-228ENST00000619157 NUDT16Q96DE0 195 aaKnown RBP10.66□□□□□ -0.7
CBWD1-228ENST00000619157 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
CBWD1-228ENST00000619157 TNS3Q68CZ2 1445 aa10.66□□□□□ -0.7
CBWD1-228ENST00000619157 MICAL2O94851 1124 aa10.65□□□□□ -0.7
CBWD1-228ENST00000619157 GDF6Q6KF10 455 aaPredicted RBP10.65□□□□□ -0.7
CBWD1-228ENST00000619157 TTC9Q92623 222 aa10.65□□□□□ -0.7
CBWD1-228ENST00000619157 GLMNQ92990 594 aa10.65□□□□□ -0.7
CBWD1-228ENST00000619157 SBNO1A3KN83 1393 aa10.65□□□□□ -0.71
CBWD1-228ENST00000619157 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
CBWD1-228ENST00000619157 AFF2P51816 1311 aa10.64□□□□□ -0.71
CBWD1-228ENST00000619157 ALS2Q96Q42 1657 aa10.64□□□□□ -0.71
CBWD1-228ENST00000619157 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
CBWD1-228ENST00000619157 J3QW42 95 aa10.64□□□□□ -0.71
CBWD1-228ENST00000619157 PTK7Q13308 1070 aa10.64□□□□□ -0.71
CBWD1-228ENST00000619157 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
CBWD1-228ENST00000619157 DZIP1LQ8IYY4 767 aaKnown RBP10.64□□□□□ -0.71
CBWD1-228ENST00000619157 ABCA3Q99758 1704 aa10.64□□□□□ -0.71
CBWD1-228ENST00000619157 AGGF1Q8N302 714 aaeCLIP10.63□□□□□ -0.71
CBWD1-228ENST00000619157 PLD4Q96BZ4 506 aa10.63□□□□□ -0.71
CBWD1-228ENST00000619157 C8orf37Q96NL8 207 aa10.63□□□□□ -0.71
CBWD1-228ENST00000619157 NSUN5Q96P11 429 aaKnown RBP10.63□□□□□ -0.71
CBWD1-228ENST00000619157 POLR3AO14802 1390 aaPredicted RBP10.63□□□□□ -0.71
CBWD1-228ENST00000619157 CRYBG1Q9Y4K1 1723 aa10.62□□□□□ -0.71
CBWD1-228ENST00000619157 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
CBWD1-228ENST00000619157 NRLP54845 237 aa10.62□□□□□ -0.71
CBWD1-228ENST00000619157 ITSN1Q15811 1721 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 ACEP12821 1306 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L15C9J2P7 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L10C9JJH3 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L13C9JLJ4 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L12C9JPN9 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L11C9JVI0 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L21D6R901 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L18D6R9N7 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L22D6RA61 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L17D6RBQ6 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L19D6RCP7 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L20D6RJB6 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 ARID4AP29374 1257 aaPredicted RBP10.61□□□□□ -0.71
CBWD1-228ENST00000619157 USP17L24Q0WX57 530 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 FNBP4Q8N3X1 1017 aaPredicted RBP10.61□□□□□ -0.71
CBWD1-228ENST00000619157 IL22RA1Q8N6P7 574 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 MRPL18Q9H0U6 180 aaKnown RBP10.61□□□□□ -0.71
CBWD1-228ENST00000619157 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
CBWD1-228ENST00000619157 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
CBWD1-228ENST00000619157 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
CBWD1-228ENST00000619157 PPIP5K1Q6PFW1 1433 aa10.6□□□□□ -0.71
CBWD1-228ENST00000619157 FLIIQ13045 1269 aa10.6□□□□□ -0.71
CBWD1-228ENST00000619157 ZNF772Q68DY9 489 aaPredicted RBP10.6□□□□□ -0.71
CBWD1-228ENST00000619157 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
CBWD1-228ENST00000619157 NGDNQ8NEJ9 315 aaKnown RBP10.6□□□□□ -0.71
CBWD1-228ENST00000619157 MARF1Q9Y4F3 1742 aaKnown RBP10.6□□□□□ -0.71
CBWD1-228ENST00000619157 SLIT2O94813 1529 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 OPLAHO14841 1288 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 XYLBO75191 536 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 GLB1P16278 677 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 SRPK2P78362 688 aaKnown RBP10.59□□□□□ -0.71
CBWD1-228ENST00000619157 ANKMY2Q8IV38 441 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
CBWD1-228ENST00000619157 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 ARHGEF10O15013 1369 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 SBNO2Q9Y2G9 1366 aa10.59□□□□□ -0.71
CBWD1-228ENST00000619157 ATRNO75882 1429 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 CD97P48960 835 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 C11orf91Q3C1V1 193 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 TESK2Q96S53 571 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 RGS12O14924 1447 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.72
CBWD1-228ENST00000619157 LOC102724428A0A0B4J2F2 783 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 MMP20O60882 483 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 GHRHP01286 108 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 SIK1P57059 783 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 SETDB1Q15047 1291 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 TRIM33Q9UPN9 1127 aa10.57□□□□□ -0.72
CBWD1-228ENST00000619157 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms