RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	PHACTR2	O75167	634 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.23	□□□□□ -0.29
TP53-222	ENST00000617185	TRIM6	Q9C030	488 aa	Predicted RBP	13.23	□□□□□ -0.29
TP53-222	ENST00000617185	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.23	□□□□□ -0.29
TP53-222	ENST00000617185	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.23	□□□□□ -0.29
TP53-222	ENST00000617185	ANKRD33B	A6NCL7	494 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	CHUK	O15111	745 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	IFIT2	P09913	472 aa	Known RBP	13.23	□□□□□ -0.29
TP53-222	ENST00000617185	PAX7	P23759	505 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	INHBE	P58166	350 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	GNG11	P61952	73 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	TUBB4B	P68371	445 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	EPHA10	Q5JZY3	1008 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	TTC19	Q6DKK2	380 aa	Predicted RBP	13.23	□□□□□ -0.29
TP53-222	ENST00000617185	RASEF	Q8IZ41	740 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	ITFG2	Q969R8	447 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	SLC24A3	Q9HC58	644 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	IFNK	Q9P0W0	207 aa		13.23	□□□□□ -0.29
TP53-222	ENST00000617185	VWA3A	A6NCI4	1184 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	CASP8	Q14790	479 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	LARP1	Q6PKG0	1096 aa	Known RBP	13.22	□□□□□ -0.29
TP53-222	ENST00000617185	FAM177A1	Q8N128	213 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-222	ENST00000617185	GBP3	Q9H0R5	595 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	GRM8	O00222	908 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	CHMP4BP1	P59074	171 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	PI4K2B	Q8TCG2	481 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	STAP2	Q9UGK3	403 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	NDUFB9	Q9Y6M9	179 aa		13.22	□□□□□ -0.29
TP53-222	ENST00000617185	MPHOSPH10	O00566	681 aa	Known RBP	13.21	□□□□□ -0.29
TP53-222	ENST00000617185	SKIDA1	Q1XH10	827 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	PREPL	Q4J6C6	727 aa	Predicted RBP	13.21	□□□□□ -0.29
TP53-222	ENST00000617185	MSANTD4	Q8NCY6	345 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	ANKZF1	Q9H8Y5	726 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	ABCB6	Q9NP58	842 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	TLR7	Q9NYK1	1049 aa	Known RBP	13.21	□□□□□ -0.29
TP53-222	ENST00000617185	NCAPD2	Q15021	1401 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	KIF1A	Q12756	1690 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	TTC36	A6NLP5	189 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	CCT5	P48643	541 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	ISM2	Q6H9L7	571 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	SRGAP1	Q7Z6B7	1085 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.21	□□□□□ -0.29
TP53-222	ENST00000617185	CLIC6	Q96NY7	704 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	WDR24	Q96S15	920 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	ODF2L	Q9ULJ1	636 aa		13.21	□□□□□ -0.29
TP53-222	ENST00000617185	HEG1	Q9ULI3	1381 aa		13.21	□□□□□ -0.3
TP53-222	ENST00000617185	KAT6B	Q8WYB5	2073 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	RNF40	O75150	1001 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	MRPL12	P52815	198 aa	Known RBP	13.2	□□□□□ -0.3
TP53-222	ENST00000617185	EVA1C	P58658	441 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	ST3GAL1	Q11201	340 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	AACS	Q86V21	672 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185		A0A0G2JS52	829 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	DDX58	O95786	925 aa	Known RBP	13.2	□□□□□ -0.3
TP53-222	ENST00000617185	A1BG	P04217	495 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	CPA1	P15085	419 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	ME3	Q16798	604 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	UBE3B	Q7Z3V4	1068 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	LINS1	Q8NG48	757 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	ERCC4	Q92889	916 aa	Predicted RBP	13.2	□□□□□ -0.3
TP53-222	ENST00000617185	DHX58	Q96C10	678 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	DCAF5	Q96JK2	942 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	NBPF3	Q9H094	633 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	PPP2R2C	Q9Y2T4	447 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	PXDNL	A1KZ92	1463 aa		13.2	□□□□□ -0.3
TP53-222	ENST00000617185	TUBB	P07437	444 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	ANKRD13D	Q6ZTN6	518 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	LSG1	Q9H089	658 aa	Known RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	CYP46A1	Q9Y6A2	500 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	AOX1	Q06278	1338 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	NEURL1B	A8MQ27	555 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	SHOX2	O60902	331 aa	Predicted RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	AP1AR	Q63HQ0	302 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	CEP112	Q8N8E3	955 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	NECAB1	Q8N987	351 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	KIFC2	Q96AC6	838 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	EDC3	Q96F86	508 aa	Known RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	SUGCT	Q9HAC7	445 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	CAPN7	Q9Y6W3	813 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	TULP1	O00294	542 aa	Predicted RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	ARHGAP6	O43182	974 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	KIN	O60870	393 aa	Known RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	SASH1	O94885	1247 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	SNRPA1	P09661	255 aa	Known RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	TBC1D8B	Q0IIM8	1120 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	WWC2	Q6AWC2	1192 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	AMOTL1	Q8IY63	956 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	CLASRP	Q8N2M8	674 aa	Known RBP	13.19	□□□□□ -0.3
TP53-222	ENST00000617185	FMNL2	Q96PY5	1086 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	TM6SF1	Q9BZW5	370 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	ZBTB3	Q9H5J0	574 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	CFAP45	Q9UL16	551 aa		13.19	□□□□□ -0.3
TP53-222	ENST00000617185	C5	P01031	1676 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185		A0A1B0GUA9	196 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	CUTA	O60888	179 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	WDHD1	O75717	1129 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-222	ENST00000617185	ADCY2	Q08462	1091 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	NEXN	Q0ZGT2	675 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	CCDC73	Q6ZRK6	1079 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	TTLL7	Q6ZT98	887 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms