RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CTAGE6Q86UF2 777 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 CTAGE4Q8IX94 777 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 ZNF830Q96NB3 372 aaPredicted RBP16.68■□□□□ 0.26
SNPH-203ENST00000614659 TUBB2BQ9BVA1 445 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 IMPACTQ9P2X3 320 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 WDR17Q8IZU2 1322 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 USP37Q86T82 979 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 TTC12Q9H892 705 aaPredicted RBP16.68■□□□□ 0.26
SNPH-203ENST00000614659 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 MAGEB6Q8N7X4 407 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 DEXIO95424 95 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 SAMM50Q9Y512 469 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
SNPH-203ENST00000614659 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
SNPH-203ENST00000614659 TRIM14Q14142 442 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 ANKRD62A6NC57 917 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 GCOM1H8Y6P7 765 aaPredicted RBP16.67■□□□□ 0.26
SNPH-203ENST00000614659 MYZAPP0CAP1 466 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 PTGS1P23219 599 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 GOLGA1Q92805 767 aa16.67■□□□□ 0.26
SNPH-203ENST00000614659 RRP36Q96EU6 259 aaKnown RBP16.67■□□□□ 0.26
SNPH-203ENST00000614659 ZNF853P0CG23 659 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 EZRP15311 586 aaKnown RBP16.66■□□□□ 0.26
SNPH-203ENST00000614659 NCBP1Q09161 790 aaKnown RBP16.66■□□□□ 0.26
SNPH-203ENST00000614659 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 ARFGAP3Q9NP61 516 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
SNPH-203ENST00000614659 IDEP14735 1019 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 ISM2Q6H9L7 571 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 VTI1AQ96AJ9 217 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 DNAI1Q9UI46 699 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 CUTAO60888 179 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 AFMP43652 599 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 ANO1Q5XXA6 986 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 DRC1Q96MC2 740 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 TIGD1Q96MW7 591 aa16.66■□□□□ 0.26
SNPH-203ENST00000614659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNPH-203ENST00000614659 CTAGE9A4FU28 777 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 APBB1IPQ7Z5R6 666 aaPredicted RBP16.65■□□□□ 0.26
SNPH-203ENST00000614659 CNGA4Q8IV77 575 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 LEO1Q8WVC0 666 aaPredicted RBP16.65■□□□□ 0.26
SNPH-203ENST00000614659 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 GLT8D2Q9H1C3 349 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
SNPH-203ENST00000614659 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 TBCAO75347 108 aaKnown RBP16.65■□□□□ 0.26
SNPH-203ENST00000614659 GNA11P29992 359 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 LPIN2Q92539 896 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 LGR6Q9HBX8 967 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 ATP2B4P23634 1241 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 CCDC94Q9BW85 323 aaPredicted RBP16.65■□□□□ 0.26
SNPH-203ENST00000614659 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 DHX58Q96C10 678 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 MADDQ8WXG6 1647 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
SNPH-203ENST00000614659 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.26
SNPH-203ENST00000614659 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 ARHGEF25Q86VW2 580 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
SNPH-203ENST00000614659 IFNKQ9P0W0 207 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 SPDYE3A6NKU9 549 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 AKR1B10O60218 316 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 TACC1O75410 805 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 NAPAP54920 295 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 C2CD5Q86YS7 1000 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 PPIP5K2O43314 1243 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 ARHGEF6Q15052 776 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 FAM227BQ96M60 508 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 USP6P35125 1406 aa16.64■□□□□ 0.25
SNPH-203ENST00000614659 KRT86O43790 486 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 IBSPP21815 317 aaPredicted RBP16.63■□□□□ 0.25
SNPH-203ENST00000614659 PRPHP41219 470 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 ZNF75DP51815 510 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 MAP2K1Q02750 393 aaPredicted RBP16.63■□□□□ 0.25
SNPH-203ENST00000614659 FMNL3Q8IVF7 1028 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 DDX12PQ92771 950 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 MED14O60244 1454 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 BEND3Q5T5X7 828 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 IFFO1Q0D2I5 559 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 PLS1Q14651 629 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
SNPH-203ENST00000614659 MBD4O95243 580 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms