RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
LINC01001-203ENST00000607448 IFFO2Q5TF58 517 aa12.8□□□□□ -0.36
LINC01001-203ENST00000607448 SLKQ9H2G2 1235 aaPredicted RBP12.8□□□□□ -0.36
LINC01001-203ENST00000607448 ANGEL1Q9UNK9 670 aaKnown RBP12.8□□□□□ -0.36
LINC01001-203ENST00000607448 NF2P35240 595 aa12.79□□□□□ -0.36
LINC01001-203ENST00000607448 APOBEC3HQ6NTF7 200 aaKnown RBP12.79□□□□□ -0.36
LINC01001-203ENST00000607448 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
LINC01001-203ENST00000607448 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
LINC01001-203ENST00000607448 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
LINC01001-203ENST00000607448 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
LINC01001-203ENST00000607448 DOCK2Q92608 1830 aa12.79□□□□□ -0.36
LINC01001-203ENST00000607448 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
LINC01001-203ENST00000607448 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
LINC01001-203ENST00000607448 PI16Q6UXB8 463 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
LINC01001-203ENST00000607448 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 ZDHHC15Q96MV8 337 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 NEUROD6Q96NK8 337 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
LINC01001-203ENST00000607448 PPP2R3BQ9Y5P8 575 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
LINC01001-203ENST00000607448 G3BP1Q13283 466 aaKnown RBP eCLIP12.77□□□□□ -0.36
LINC01001-203ENST00000607448 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 CEP85Q6P2H3 762 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 SIRT2Q8IXJ6 389 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 DCTPP1Q9H773 170 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.36
LINC01001-203ENST00000607448 MAST3O60307 1309 aa12.77□□□□□ -0.37
LINC01001-203ENST00000607448 MAP3K11Q16584 847 aa12.77□□□□□ -0.37
LINC01001-203ENST00000607448 HHIPL2Q6UWX4 724 aa12.77□□□□□ -0.37
LINC01001-203ENST00000607448 GNL3LQ9NVN8 582 aaKnown RBP12.77□□□□□ -0.37
LINC01001-203ENST00000607448 SEMA3EO15041 775 aa12.76□□□□□ -0.37
LINC01001-203ENST00000607448 CDC45O75419 566 aa12.76□□□□□ -0.37
LINC01001-203ENST00000607448 USP2O75604 605 aaPredicted RBP12.76□□□□□ -0.37
LINC01001-203ENST00000607448 SURF6O75683 361 aaKnown RBP12.76□□□□□ -0.37
LINC01001-203ENST00000607448 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
LINC01001-203ENST00000607448 ZNF384Q8TF68 577 aa12.76□□□□□ -0.37
LINC01001-203ENST00000607448 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
LINC01001-203ENST00000607448 HMG20BQ9P0W2 317 aa12.76□□□□□ -0.37
LINC01001-203ENST00000607448 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
LINC01001-203ENST00000607448 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
LINC01001-203ENST00000607448 MCAMP43121 646 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 TNFAIP1Q13829 316 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 TNNI3KQ59H18 835 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 RNF186Q9NXI6 227 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 TLR7Q9NYK1 1049 aaKnown RBP12.75□□□□□ -0.37
LINC01001-203ENST00000607448 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 FPGT-TNNI3KV9GXZ4 949 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 FOCADQ5VW36 1801 aa12.75□□□□□ -0.37
LINC01001-203ENST00000607448 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
LINC01001-203ENST00000607448 ZBTB22O15209 634 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 TRPA1O75762 1119 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
LINC01001-203ENST00000607448 NFIAQ12857 509 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
LINC01001-203ENST00000607448 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
LINC01001-203ENST00000607448 GJA5P36382 358 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
LINC01001-203ENST00000607448 L1TD1Q5T7N2 865 aaKnown RBP12.73□□□□□ -0.37
LINC01001-203ENST00000607448 SPRYD7Q5W111 196 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 CA12O43570 354 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 HMMRO75330 724 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 CAPN15O75808 1086 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 PTMSP20962 102 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 MCM4P33991 863 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 TNNI2P48788 182 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 TCP10Q12799 353 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 EAF2Q96CJ1 260 aaPredicted RBP12.73□□□□□ -0.37
LINC01001-203ENST00000607448 CCDC8Q9H0W5 538 aaPredicted RBP12.73□□□□□ -0.37
LINC01001-203ENST00000607448 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
LINC01001-203ENST00000607448 DBNLQ9UJU6 430 aaKnown RBP12.73□□□□□ -0.37
LINC01001-203ENST00000607448 RFX7Q2KHR2 1363 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 GAKO14976 1311 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 SIPA1L1O43166 1804 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
LINC01001-203ENST00000607448 MECOMQ03112 1051 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-203ENST00000607448 FAM83AQ86UY5 434 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 WNK4Q96J92 1243 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms