RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 LDHBP07195 334 aaKnown RBP18.52■□□□□ 0.56
CTSA-216ENST00000607212 FKBP1CQ5VVH2 108 aa18.52■□□□□ 0.56
CTSA-216ENST00000607212 PTCH2Q9Y6C5 1203 aa18.52■□□□□ 0.56
CTSA-216ENST00000607212 BTBD19C9JJ37 291 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 IRF6O14896 467 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 EN2P19622 333 aaPredicted RBP18.51■□□□□ 0.55
CTSA-216ENST00000607212 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
CTSA-216ENST00000607212 PPIL2Q13356 520 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 DIXDC1Q155Q3 683 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 GCC1Q96CN9 775 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 CDCA7LQ96GN5 454 aa18.51■□□□□ 0.55
CTSA-216ENST00000607212 RBBP6Q7Z6E9 1792 aaKnown RBP18.5■□□□□ 0.55
CTSA-216ENST00000607212 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
CTSA-216ENST00000607212 FAM151AQ8WW52 585 aa18.5■□□□□ 0.55
CTSA-216ENST00000607212 USP40Q9NVE5 1235 aa18.5■□□□□ 0.55
CTSA-216ENST00000607212 HDAC5Q9UQL6 1122 aa18.5■□□□□ 0.55
CTSA-216ENST00000607212 DAGLAQ9Y4D2 1042 aa18.5■□□□□ 0.55
CTSA-216ENST00000607212 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
CTSA-216ENST00000607212 KIAA0100Q14667 2235 aaKnown RBP18.5■□□□□ 0.55
CTSA-216ENST00000607212 TLR2O60603 784 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 PRDX5P30044 214 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 INPP5BP32019 993 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 CAP1Q01518 475 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 CDC42EP5Q6NZY7 148 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 DENND2AQ9ULE3 1009 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
CTSA-216ENST00000607212 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
CTSA-216ENST00000607212 PPATQ06203 517 aa18.48■□□□□ 0.55
CTSA-216ENST00000607212 ATG9AQ7Z3C6 839 aa18.48■□□□□ 0.55
CTSA-216ENST00000607212 ZSCAN29Q8IWY8 852 aaPredicted RBP18.48■□□□□ 0.55
CTSA-216ENST00000607212 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
CTSA-216ENST00000607212 ARHGAP39Q9C0H5 1083 aa18.48■□□□□ 0.55
CTSA-216ENST00000607212 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
CTSA-216ENST00000607212 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
CTSA-216ENST00000607212 CIAO1O76071 339 aa18.47■□□□□ 0.55
CTSA-216ENST00000607212 IL15P40933 162 aaPredicted RBP18.47■□□□□ 0.55
CTSA-216ENST00000607212 LACTBP83111 547 aaPredicted RBP18.47■□□□□ 0.55
CTSA-216ENST00000607212 DZIP1Q86YF9 867 aaKnown RBP18.47■□□□□ 0.55
CTSA-216ENST00000607212 SH3TC2Q8TF17 1288 aa18.47■□□□□ 0.55
CTSA-216ENST00000607212 ZNF333Q96JL9 665 aa18.47■□□□□ 0.55
CTSA-216ENST00000607212 ZCCHC17Q9NP64 241 aaKnown RBP18.47■□□□□ 0.55
CTSA-216ENST00000607212 CPA4Q9UI42 421 aa18.47■□□□□ 0.55
CTSA-216ENST00000607212 FBXO3Q9UK99 471 aa18.47■□□□□ 0.55
CTSA-216ENST00000607212 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
CTSA-216ENST00000607212 PHKA1P46020 1223 aa18.46■□□□□ 0.55
CTSA-216ENST00000607212 NFIAQ12857 509 aa18.46■□□□□ 0.55
CTSA-216ENST00000607212 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
CTSA-216ENST00000607212 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
CTSA-216ENST00000607212 DOCK2Q92608 1830 aa18.45■□□□□ 0.54
CTSA-216ENST00000607212 PDHXO00330 501 aa18.45■□□□□ 0.54
CTSA-216ENST00000607212 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
CTSA-216ENST00000607212 SEMA3EO15041 775 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 ADORA1P30542 326 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 PSMC4P43686 418 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 ANKRD23Q86SG2 305 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 SLF2Q8IX21 1173 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 PICK1Q9NRD5 415 aa18.44■□□□□ 0.54
CTSA-216ENST00000607212 GNRH1P01148 92 aa18.43■□□□□ 0.54
CTSA-216ENST00000607212 HOXD10P28358 340 aa18.43■□□□□ 0.54
CTSA-216ENST00000607212 PICALMQ13492 652 aa18.43■□□□□ 0.54
CTSA-216ENST00000607212 CCDC102BQ68D86 513 aa18.43■□□□□ 0.54
CTSA-216ENST00000607212 BIN2Q9UBW5 565 aaPredicted RBP18.43■□□□□ 0.54
CTSA-216ENST00000607212 FAM198AQ9UFP1 575 aa18.43■□□□□ 0.54
CTSA-216ENST00000607212 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
CTSA-216ENST00000607212 RGS3P49796 1198 aa18.42■□□□□ 0.54
CTSA-216ENST00000607212 PRMT2P55345 433 aa18.42■□□□□ 0.54
CTSA-216ENST00000607212 GADL1Q6ZQY3 521 aa18.42■□□□□ 0.54
CTSA-216ENST00000607212 PARK7Q99497 189 aaKnown RBP18.42■□□□□ 0.54
CTSA-216ENST00000607212 MEIS3Q99687 375 aa18.42■□□□□ 0.54
CTSA-216ENST00000607212 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
CTSA-216ENST00000607212 GORABQ5T7V8 394 aa18.41■□□□□ 0.54
CTSA-216ENST00000607212 SPTY2D1Q68D10 685 aaPredicted RBP18.41■□□□□ 0.54
CTSA-216ENST00000607212 C17orf99Q6UX52 265 aa18.41■□□□□ 0.54
CTSA-216ENST00000607212 ZFPM1Q8IX07 1006 aa18.41■□□□□ 0.54
CTSA-216ENST00000607212 NEUROD6Q96NK8 337 aa18.41■□□□□ 0.54
CTSA-216ENST00000607212 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
CTSA-216ENST00000607212 SRGAP3O43295 1099 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 GNAI3P08754 354 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 BTDP43251 543 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 TIMM10P62072 90 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 HABP4Q5JVS0 413 aaKnown RBP18.4■□□□□ 0.54
CTSA-216ENST00000607212 NOL9Q5SY16 702 aaKnown RBP18.4■□□□□ 0.54
CTSA-216ENST00000607212 COPRSQ9NQ92 184 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 KCNH4Q9UQ05 1017 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 AKAP2Q9Y2D5 859 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 ZHX2Q9Y6X8 837 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 MYPNQ86TC9 1320 aa18.4■□□□□ 0.54
CTSA-216ENST00000607212 RASGRF1Q13972 1273 aa18.39■□□□□ 0.53
CTSA-216ENST00000607212 MVPQ14764 893 aaKnown RBP18.39■□□□□ 0.53
CTSA-216ENST00000607212 ERICH6Q7L0X2 663 aa18.39■□□□□ 0.53
CTSA-216ENST00000607212 SCYL3Q8IZE3 742 aa18.39■□□□□ 0.53
CTSA-216ENST00000607212 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
CTSA-216ENST00000607212 SRRDQ9UH36 339 aa18.39■□□□□ 0.53
CTSA-216ENST00000607212 A0A1B0GUL7 405 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 CXCL11O14625 94 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 ENTPD3O75355 529 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 CYP2C8P10632 490 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms