RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 SLC5A1P13866 664 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 PPATQ06203 517 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 PPIL2Q13356 520 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 KIF22Q14807 665 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 HABP4Q5JVS0 413 aaKnown RBP16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 MIGA2Q7L4E1 593 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 FAM151AQ8WW52 585 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 ZNF341Q9BYN7 854 aa16.07■□□□□ 0.16
NEK4P3-201ENST00000604859 E9PSI1 815 aa16.06■□□□□ 0.16
NEK4P3-201ENST00000604859 LACTBP83111 547 aaPredicted RBP16.06■□□□□ 0.16
NEK4P3-201ENST00000604859 SLC4A8Q2Y0W8 1093 aa16.06■□□□□ 0.16
NEK4P3-201ENST00000604859 ARHGAP39Q9C0H5 1083 aa16.06■□□□□ 0.16
NEK4P3-201ENST00000604859 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
NEK4P3-201ENST00000604859 GNRH1P01148 92 aa16.05■□□□□ 0.16
NEK4P3-201ENST00000604859 INPP5BP32019 993 aa16.05■□□□□ 0.16
NEK4P3-201ENST00000604859 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
NEK4P3-201ENST00000604859 TCP10Q12799 353 aa16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 C17orf99Q6UX52 265 aa16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 ATG9AQ7Z3C6 839 aa16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
NEK4P3-201ENST00000604859 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 MYCP01106 439 aaPredicted RBP16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 PRMT2P55345 433 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 SLFN5Q08AF3 891 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 CEP126Q9P2H0 1117 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 DAGLAQ9Y4D2 1042 aa16.03■□□□□ 0.16
NEK4P3-201ENST00000604859 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 PRDX5P30044 214 aa16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 USP40Q9NVE5 1235 aa16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 GNL3LQ9NVN8 582 aaKnown RBP16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 CPA4Q9UI42 421 aa16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.16
NEK4P3-201ENST00000604859 PDHXO00330 501 aa16.01■□□□□ 0.15
NEK4P3-201ENST00000604859 CIAO1O76071 339 aa16.01■□□□□ 0.15
NEK4P3-201ENST00000604859 NFIAQ12857 509 aa16.01■□□□□ 0.15
NEK4P3-201ENST00000604859 ATP2B3Q16720 1220 aa16.01■□□□□ 0.15
NEK4P3-201ENST00000604859 SIL1Q9H173 461 aa16.01■□□□□ 0.15
NEK4P3-201ENST00000604859 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
NEK4P3-201ENST00000604859 UBTFL1P0CB47 393 aaPredicted RBP16■□□□□ 0.15
NEK4P3-201ENST00000604859 HOXD10P28358 340 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 PSMC4P43686 418 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
NEK4P3-201ENST00000604859 TRIM47Q96LD4 638 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 SRRDQ9UH36 339 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 DENND2AQ9ULE3 1009 aa16■□□□□ 0.15
NEK4P3-201ENST00000604859 SALL1Q9NSC2 1324 aa15.99■□□□□ 0.15
NEK4P3-201ENST00000604859 SEMA3EO15041 775 aa15.99■□□□□ 0.15
NEK4P3-201ENST00000604859 FMNL1O95466 1100 aaPredicted RBP15.99■□□□□ 0.15
NEK4P3-201ENST00000604859 CTGFP29279 349 aa15.99■□□□□ 0.15
NEK4P3-201ENST00000604859 MOGSQ13724 837 aa15.99■□□□□ 0.15
NEK4P3-201ENST00000604859 ZFPM1Q8IX07 1006 aa15.99■□□□□ 0.15
NEK4P3-201ENST00000604859 CXCL11O14625 94 aa15.98■□□□□ 0.15
NEK4P3-201ENST00000604859 IL15P40933 162 aaPredicted RBP15.98■□□□□ 0.15
NEK4P3-201ENST00000604859 RAET1EQ8TD07 263 aa15.98■□□□□ 0.15
NEK4P3-201ENST00000604859 CDCA7LQ96GN5 454 aa15.98■□□□□ 0.15
NEK4P3-201ENST00000604859 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
NEK4P3-201ENST00000604859 PHF20L1A8MW92 1017 aa15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 ZBTB22O15209 634 aa15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 OSBPP22059 807 aa15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 PHKA1P46020 1223 aa15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 MTFR1Q15390 333 aa15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 ZGPATQ8N5A5 531 aaKnown RBP15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 IDI2Q9BXS1 227 aa15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 COLQQ9Y215 455 aaPredicted RBP15.97■□□□□ 0.15
NEK4P3-201ENST00000604859 ADGRA2Q96PE1 1338 aa15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 GRK4P32298 578 aa15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 GPAT2Q6NUI2 795 aa15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 PA2G4Q9UQ80 394 aaKnown RBP15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 LRRFIP2Q9Y608 721 aaKnown RBP15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 MGAMO43451 1857 aa15.96■□□□□ 0.15
NEK4P3-201ENST00000604859 ENTPD3O75355 529 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 CYP2C8P10632 490 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 RGS3P49796 1198 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 TIMM10P62072 90 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 FASTKD5Q7L8L6 764 aaKnown RBP15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 NKX2-3Q8TAU0 364 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 PARK7Q99497 189 aaKnown RBP15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 COPRSQ9NQ92 184 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 PICK1Q9NRD5 415 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 ZHX2Q9Y6X8 837 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 CEP290O15078 2479 aa15.95■□□□□ 0.14
NEK4P3-201ENST00000604859 MYPNQ86TC9 1320 aa15.94■□□□□ 0.14
NEK4P3-201ENST00000604859 DOCK2Q92608 1830 aa15.94■□□□□ 0.14
NEK4P3-201ENST00000604859 H0YGN5 161 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms