RNA–Protein interactions for RNA: ENST00000601762.5

FARP1-236, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-236ENST00000601762 PLAAQ9Y263 795 aa4.38□□□□□ -1.71
FARP1-236ENST00000601762 PCDHB14Q9Y5E9 798 aa4.38□□□□□ -1.71
FARP1-236ENST00000601762 ARID4BQ4LE39 1312 aaPredicted RBP4.38□□□□□ -1.71
FARP1-236ENST00000601762 DDAH1O94760 285 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 GJB6O95452 261 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 VIL1P09327 827 aaKnown RBP4.37□□□□□ -1.71
FARP1-236ENST00000601762 CD33P20138 364 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 ATP11AP98196 1134 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 AP3B2Q13367 1082 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 SEPT6Q14141 434 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 LONRF2Q1L5Z9 754 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 HSP90AB2PQ58FF8 381 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 ZC3H12BQ5HYM0 836 aaKnown RBP4.37□□□□□ -1.71
FARP1-236ENST00000601762 CEP135Q66GS9 1140 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 EEPD1Q7L9B9 569 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 CACTIN-AS1Q8N1I8 211 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 TAB3Q8N5C8 712 aaPredicted RBP4.37□□□□□ -1.71
FARP1-236ENST00000601762 IRF2BPLQ9H1B7 796 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 TNKS2Q9H2K2 1166 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 CBX8Q9HC52 389 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 DDX56Q9NY93 547 aaKnown RBP4.37□□□□□ -1.71
FARP1-236ENST00000601762 KLHL42Q9P2K6 505 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 PRR12Q9ULL5 1215 aa4.37□□□□□ -1.71
FARP1-236ENST00000601762 CCDC163A0A0D9SF12 145 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 SLC35F4A4IF30 521 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 SOBPA7XYQ1 873 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 MEIS3P2A8K0S8 358 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 ZBTB42B2RXF5 422 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 J3QW42 95 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 S100BP04271 92 aaPredicted RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 THBS1P07996 1170 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 EIF2AK2P19525 551 aaKnown RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 GUCY2CP25092 1073 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 MASP1P48740 699 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 ZNF157P51786 506 aaPredicted RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 CABP4P57796 275 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 AMPD3Q01432 767 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 SSRP1Q08945 709 aaKnown RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 ZNF252P-AS1Q0IIN9 211 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 SQSTM1Q13501 440 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 NCAPHQ15003 741 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 ZNF423Q2M1K9 1284 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 FOXR1Q6PIV2 292 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 RAB44Q7Z6P3 723 aaPredicted RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 FAM178BQ8IXR5 827 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 RPUSD2Q8IZ73 545 aaKnown RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 ZSWIM2Q8NEG5 633 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 GAL3ST3Q96A11 431 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 ABHD17AQ96GS6 310 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 ADAM19Q9H013 955 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 EPN3Q9H201 632 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 KANSL2Q9H9L4 492 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 DNAJB12Q9NXW2 375 aaKnown RBP4.36□□□□□ -1.71
FARP1-236ENST00000601762 SOX13Q9UN79 622 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 TACC3Q9Y6A5 838 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 KDM2BQ8NHM5 1336 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 PRR36Q9H6K5 1346 aa4.36□□□□□ -1.71
FARP1-236ENST00000601762 A0A1W2PQH9 124 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 IQCA1LA6NCM1 817 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 SIN3BO75182 1162 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 ESRRAP11474 423 aaPredicted RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 FGFR3P22607 806 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 MLLT1Q03111 559 aaPredicted RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 PTSQ03393 145 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 IKBKEQ14164 716 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 DBN1Q16643 649 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 PLEKHG6Q3KR16 790 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 TMEM67Q5HYA8 995 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 RASIP1Q5U651 963 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 ZNF468Q5VIY5 522 aaPredicted RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 HGSNATQ68CP4 663 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 INTS3Q68E01 1043 aaKnown RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 HFE2Q6ZVN8 426 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 KRT26Q7Z3Y9 468 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 VN1R5Q7Z5H4 357 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 TTC6Q86TZ1 520 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 ZSCAN1Q8NBB4 408 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 TMEM40Q8WWA1 233 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 SLC26A8Q96RN1 970 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 CEP89Q96ST8 783 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 UBE2OQ9C0C9 1292 aaKnown RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 IGFLR1Q9H665 355 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 SOX17Q9H6I2 414 aaPredicted RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 PHAXQ9H814 394 aaKnown RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 SENP2Q9HC62 589 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 ZMYM5Q9UJ78 669 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 LEMD3Q9Y2U8 911 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 PPME1Q9Y570 386 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 PTCH2Q9Y6C5 1203 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 SNCAIPQ9Y6H5 919 aa4.35□□□□□ -1.71
FARP1-236ENST00000601762 TTBK1Q5TCY1 1321 aaPredicted RBP4.35□□□□□ -1.71
FARP1-236ENST00000601762 PARNO95453 639 aaKnown RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 GSTP1P09211 210 aaKnown RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 PDGFRBP09619 1106 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 ELMSAN1Q6PJG2 1045 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 C6orf15Q6UXA7 325 aaPredicted RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 SYT9Q86SS6 491 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 FAM35AQ86V20 835 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 LRRC47Q8N1G4 583 aaKnown RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 PRPF38AQ8NAV1 312 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms