RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 LAMA3Q16787 3333 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 RPAP1Q9BWH6 1393 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-211ENST00000601614 DOCK3Q8IZD9 2030 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 ZBTB7BO15156 539 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-211ENST00000601614 FMNL1O95466 1100 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-211ENST00000601614 PRKCZQ05513 592 aa20.3■□□□□ 0.84
SSBP4-211ENST00000601614 PPATQ06203 517 aa20.3■□□□□ 0.84
SSBP4-211ENST00000601614 NKX2-3Q8TAU0 364 aa20.3■□□□□ 0.84
SSBP4-211ENST00000601614 HTATIP2Q9BUP3 242 aa20.3■□□□□ 0.84
SSBP4-211ENST00000601614 RNF208Q9H0X6 261 aa20.3■□□□□ 0.84
SSBP4-211ENST00000601614 IL16Q14005 1332 aa20.29■□□□□ 0.84
SSBP4-211ENST00000601614 U2AF1L4Q8WU68 220 aaKnown RBP20.29■□□□□ 0.84
SSBP4-211ENST00000601614 SUCLG2Q96I99 432 aa20.29■□□□□ 0.84
SSBP4-211ENST00000601614 KCNH4Q9UQ05 1017 aa20.29■□□□□ 0.84
SSBP4-211ENST00000601614 PTPRFP10586 1907 aa20.29■□□□□ 0.84
SSBP4-211ENST00000601614 HOXD10P28358 340 aa20.28■□□□□ 0.84
SSBP4-211ENST00000601614 FKBP1CQ5VVH2 108 aa20.28■□□□□ 0.84
SSBP4-211ENST00000601614 LRCH3Q96II8 777 aa20.28■□□□□ 0.84
SSBP4-211ENST00000601614 ZNF341Q9BYN7 854 aa20.28■□□□□ 0.84
SSBP4-211ENST00000601614 UNC93B1Q9H1C4 597 aa20.28■□□□□ 0.84
SSBP4-211ENST00000601614 GABRQQ9UN88 632 aa20.28■□□□□ 0.84
SSBP4-211ENST00000601614 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
SSBP4-211ENST00000601614 BCRP11274 1271 aa20.27■□□□□ 0.84
SSBP4-211ENST00000601614 LRRC24Q50LG9 513 aa20.27■□□□□ 0.84
SSBP4-211ENST00000601614 DCAF15Q66K64 600 aa20.27■□□□□ 0.84
SSBP4-211ENST00000601614 TBC1D22AQ8WUA7 517 aa20.27■□□□□ 0.84
SSBP4-211ENST00000601614 TMOD2Q9NZR1 351 aa20.27■□□□□ 0.84
SSBP4-211ENST00000601614 ZNF112Q9UJU3 913 aa20.27■□□□□ 0.84
SSBP4-211ENST00000601614 BCAMP50895 628 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 EXOSC9Q06265 439 aaKnown RBP20.26■□□□□ 0.83
SSBP4-211ENST00000601614 GPAT2Q6NUI2 795 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 VGLL2Q8N8G2 317 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 MRIQ9BWK5 157 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
SSBP4-211ENST00000601614 BIN2Q9UBW5 565 aaPredicted RBP20.26■□□□□ 0.83
SSBP4-211ENST00000601614 NR2E3Q9Y5X4 410 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
SSBP4-211ENST00000601614 CUL9Q8IWT3 2517 aa20.25■□□□□ 0.83
SSBP4-211ENST00000601614 CYP2C8P10632 490 aa20.25■□□□□ 0.83
SSBP4-211ENST00000601614 UBXN2AP68543 259 aa20.25■□□□□ 0.83
SSBP4-211ENST00000601614 HOOK2Q96ED9 719 aa20.25■□□□□ 0.83
SSBP4-211ENST00000601614 DOCK2Q92608 1830 aa20.25■□□□□ 0.83
SSBP4-211ENST00000601614 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-211ENST00000601614 SGPL1O95470 568 aa20.24■□□□□ 0.83
SSBP4-211ENST00000601614 NBPF7P0C2Y1 421 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-211ENST00000601614 PHIPQ8WWQ0 1821 aa20.24■□□□□ 0.83
SSBP4-211ENST00000601614 FCGRTP55899 365 aa20.23■□□□□ 0.83
SSBP4-211ENST00000601614 TCP10Q12799 353 aa20.23■□□□□ 0.83
SSBP4-211ENST00000601614 HHIPL2Q6UWX4 724 aa20.23■□□□□ 0.83
SSBP4-211ENST00000601614 SLAIN1Q8ND83 568 aa20.23■□□□□ 0.83
SSBP4-211ENST00000601614 ALDH1L1O75891 902 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 ELNP15502 786 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 NFIAQ12857 509 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 CAVIN4Q5BKX8 364 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 METTL24Q5JXM2 366 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 NOL9Q5SY16 702 aaKnown RBP20.22■□□□□ 0.83
SSBP4-211ENST00000601614 FAM151AQ8WW52 585 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 PARK7Q99497 189 aaKnown RBP20.22■□□□□ 0.83
SSBP4-211ENST00000601614 BICC1Q9H694 974 aaKnown RBP20.22■□□□□ 0.83
SSBP4-211ENST00000601614 STAP2Q9UGK3 403 aa20.22■□□□□ 0.83
SSBP4-211ENST00000601614 A0A1W2PPC1 479 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 ADCY3O60266 1144 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 PDE8BO95263 885 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 SLC4A10Q6U841 1118 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-211ENST00000601614 SUGT1Q9Y2Z0 365 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 MAST3O60307 1309 aa20.21■□□□□ 0.83
SSBP4-211ENST00000601614 EVI5O60447 810 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 INHAP05111 366 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 FLT3LGP49771 235 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 RABL6Q3YEC7 729 aaPredicted RBP20.2■□□□□ 0.82
SSBP4-211ENST00000601614 CDC42EP5Q6NZY7 148 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 ZFPM1Q8IX07 1006 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 FAM198AQ9UFP1 575 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 DAGLAQ9Y4D2 1042 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
SSBP4-211ENST00000601614 FGFR2P21802 821 aa20.19■□□□□ 0.82
SSBP4-211ENST00000601614 DIXDC1Q155Q3 683 aa20.19■□□□□ 0.82
SSBP4-211ENST00000601614 DEFB118Q96PH6 123 aa20.19■□□□□ 0.82
SSBP4-211ENST00000601614 DOCK1Q14185 1865 aa20.19■□□□□ 0.82
SSBP4-211ENST00000601614 A0A0C4DFX4 3053 aa20.19■□□□□ 0.82
SSBP4-211ENST00000601614 UTYO14607 1347 aa20.19■□□□□ 0.82
SSBP4-211ENST00000601614 CXCL11O14625 94 aa20.18■□□□□ 0.82
SSBP4-211ENST00000601614 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-211ENST00000601614 MYH2Q9UKX2 1941 aa20.17■□□□□ 0.82
SSBP4-211ENST00000601614 SLURP2P0DP57 97 aa20.17■□□□□ 0.82
SSBP4-211ENST00000601614 DIS3LQ8TF46 1054 aaKnown RBP20.17■□□□□ 0.82
SSBP4-211ENST00000601614 CRISPLD2Q9H0B8 497 aa20.17■□□□□ 0.82
SSBP4-211ENST00000601614 PAK6Q9NQU5 681 aaPredicted RBP20.17■□□□□ 0.82
SSBP4-211ENST00000601614 A0A0G2JLL6 359 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-211ENST00000601614 PHF20L1A8MW92 1017 aa20.16■□□□□ 0.82
SSBP4-211ENST00000601614 TFRCP02786 760 aaKnown RBP20.16■□□□□ 0.82
SSBP4-211ENST00000601614 PRDX5P30044 214 aa20.16■□□□□ 0.82
SSBP4-211ENST00000601614 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
SSBP4-211ENST00000601614 PRRT2Q7Z6L0 340 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms