RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ALDH1A1P00352 501 aa28■■■□□ 2.07
SSBP4-209ENST00000601357 MAP3K9P80192 1104 aa28■■■□□ 2.07
SSBP4-209ENST00000601357 ATP8B2P98198 1209 aa28■■■□□ 2.07
SSBP4-209ENST00000601357 G3BP1Q13283 466 aaKnown RBP eCLIP28■■■□□ 2.07
SSBP4-209ENST00000601357 ITPRIPQ8IWB1 547 aa28■■■□□ 2.07
SSBP4-209ENST00000601357 ZNF296Q8WUU4 475 aaPredicted RBP28■■■□□ 2.07
SSBP4-209ENST00000601357 OPTNQ96CV9 577 aa28■■■□□ 2.07
SSBP4-209ENST00000601357 ELP3Q9H9T3 547 aa28■■■□□ 2.07
SSBP4-209ENST00000601357 GPR25O00155 361 aa27.99■■■□□ 2.07
SSBP4-209ENST00000601357 IGF2BP3O00425 579 aaKnown RBP eCLIP27.99■■■□□ 2.07
SSBP4-209ENST00000601357 FAM151AQ8WW52 585 aa27.99■■■□□ 2.07
SSBP4-209ENST00000601357 HOOK2Q96ED9 719 aa27.99■■■□□ 2.07
SSBP4-209ENST00000601357 NEUROD6Q96NK8 337 aa27.99■■■□□ 2.07
SSBP4-209ENST00000601357 R3HDMLQ9H3Y0 253 aa27.99■■■□□ 2.07
SSBP4-209ENST00000601357 GAKO14976 1311 aa27.98■■■□□ 2.07
SSBP4-209ENST00000601357 TESPA1A2RU30 521 aaPredicted RBP27.98■■■□□ 2.07
SSBP4-209ENST00000601357 CTU1Q7Z7A3 348 aaKnown RBP27.98■■■□□ 2.07
SSBP4-209ENST00000601357 C1orf115Q9H7X2 142 aa27.98■■■□□ 2.07
SSBP4-209ENST00000601357 CCDC85CA6NKD9 419 aa27.97■■■□□ 2.07
SSBP4-209ENST00000601357 NFIAQ12857 509 aa27.97■■■□□ 2.07
SSBP4-209ENST00000601357 ARID4AP29374 1257 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-209ENST00000601357 CNKSR2Q8WXI2 1034 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 FAM163AQ96GL9 167 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-209ENST00000601357 MS4A4AQ96JQ5 239 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 USP40Q9NVE5 1235 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 HMG20BQ9P0W2 317 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 FAM198AQ9UFP1 575 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 ABCF2Q9UG63 623 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 CSADQ9Y600 493 aa27.96■■■□□ 2.07
SSBP4-209ENST00000601357 PTPN18Q99952 460 aa27.95■■■□□ 2.06
SSBP4-209ENST00000601357 GPR108Q9NPR9 543 aa27.95■■■□□ 2.06
SSBP4-209ENST00000601357 SNCAIPQ9Y6H5 919 aa27.95■■■□□ 2.06
SSBP4-209ENST00000601357 RFX7Q2KHR2 1363 aa27.95■■■□□ 2.06
SSBP4-209ENST00000601357 TCP10Q12799 353 aa27.94■■■□□ 2.06
SSBP4-209ENST00000601357 DCAF15Q66K64 600 aa27.94■■■□□ 2.06
SSBP4-209ENST00000601357 SPTY2D1Q68D10 685 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-209ENST00000601357 DZIP1Q86YF9 867 aaKnown RBP27.94■■■□□ 2.06
SSBP4-209ENST00000601357 WRNIP1Q96S55 665 aa27.94■■■□□ 2.06
SSBP4-209ENST00000601357 NOP58Q9Y2X3 529 aaKnown RBP27.94■■■□□ 2.06
SSBP4-209ENST00000601357 SPDYE5A6NIY4 337 aa27.93■■■□□ 2.06
SSBP4-209ENST00000601357 GORABQ5T7V8 394 aa27.93■■■□□ 2.06
SSBP4-209ENST00000601357 PI16Q6UXB8 463 aa27.93■■■□□ 2.06
SSBP4-209ENST00000601357 SPATA5Q8NB90 893 aa27.93■■■□□ 2.06
SSBP4-209ENST00000601357 ZNF384Q8TF68 577 aa27.93■■■□□ 2.06
SSBP4-209ENST00000601357 IDI2Q9BXS1 227 aa27.93■■■□□ 2.06
SSBP4-209ENST00000601357 TNNI3KQ59H18 835 aa27.92■■■□□ 2.06
SSBP4-209ENST00000601357 SLF2Q8IX21 1173 aa27.92■■■□□ 2.06
SSBP4-209ENST00000601357 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
SSBP4-209ENST00000601357 ZKSCAN4Q969J2 545 aaPredicted RBP27.92■■■□□ 2.06
SSBP4-209ENST00000601357 ZNF341Q9BYN7 854 aa27.92■■■□□ 2.06
SSBP4-209ENST00000601357 FPGT-TNNI3KV9GXZ4 949 aa27.92■■■□□ 2.06
SSBP4-209ENST00000601357 DOCK2Q92608 1830 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 FKTNO75072 461 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 SURF6O75683 361 aaKnown RBP27.91■■■□□ 2.06
SSBP4-209ENST00000601357 MCAMP43121 646 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 MECOMQ03112 1051 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 MIGA2Q7L4E1 593 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 OTUD5Q96G74 571 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 MROH7-TTC4A0A0A0MT08 1334 aa27.91■■■□□ 2.06
SSBP4-209ENST00000601357 OTUD7BQ6GQQ9 843 aa27.9■■■□□ 2.06
SSBP4-209ENST00000601357 ERICH6Q7L0X2 663 aa27.9■■■□□ 2.06
SSBP4-209ENST00000601357 ZFPM1Q8IX07 1006 aa27.9■■■□□ 2.06
SSBP4-209ENST00000601357 BRI3BPQ8WY22 251 aa27.9■■■□□ 2.06
SSBP4-209ENST00000601357 ZNF112Q9UJU3 913 aa27.9■■■□□ 2.06
SSBP4-209ENST00000601357 AK9Q5TCS8 1911 aa27.9■■■□□ 2.06
SSBP4-209ENST00000601357 ATRNL1Q5VV63 1379 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 ENTPD3O75355 529 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 UQCRFS1P1P0C7P4 283 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 RGS19P49795 217 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 GTF2A2P52657 109 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 PKN2Q16513 984 aaKnown RBP27.89■■■□□ 2.06
SSBP4-209ENST00000601357 CEP85Q6P2H3 762 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 ERO1BQ86YB8 467 aa27.89■■■□□ 2.06
SSBP4-209ENST00000601357 GPR75-ASB3A0A0A6YYF3 556 aa27.88■■■□□ 2.05
SSBP4-209ENST00000601357 RGS3P49796 1198 aa27.88■■■□□ 2.05
SSBP4-209ENST00000601357 CRHR2Q13324 411 aa27.88■■■□□ 2.05
SSBP4-209ENST00000601357 OS9Q13438 667 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-209ENST00000601357 TBC1D9Q6ZT07 1266 aa27.88■■■□□ 2.05
SSBP4-209ENST00000601357 NSUN4Q96CB9 384 aaKnown RBP27.88■■■□□ 2.05
SSBP4-209ENST00000601357 WDHD1O75717 1129 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-209ENST00000601357 BTDP43251 543 aa27.87■■■□□ 2.05
SSBP4-209ENST00000601357 DBNDD2Q9BQY9 259 aa27.87■■■□□ 2.05
SSBP4-209ENST00000601357 HTTP42858 3142 aa27.86■■■□□ 2.05
SSBP4-209ENST00000601357 CCL15-CCL14A0A0B4J2E2 113 aa27.86■■■□□ 2.05
SSBP4-209ENST00000601357 INPP5BP32019 993 aa27.86■■■□□ 2.05
SSBP4-209ENST00000601357 RHBDL3P58872 404 aa27.86■■■□□ 2.05
SSBP4-209ENST00000601357 CCL15Q16663 113 aa27.86■■■□□ 2.05
SSBP4-209ENST00000601357 MAST2Q6P0Q8 1798 aa27.86■■■□□ 2.05
SSBP4-209ENST00000601357 IRF6O14896 467 aa27.85■■■□□ 2.05
SSBP4-209ENST00000601357 MS4A1P11836 297 aa27.85■■■□□ 2.05
SSBP4-209ENST00000601357 PPIL2Q13356 520 aa27.85■■■□□ 2.05
SSBP4-209ENST00000601357 SH3BP5LQ7L8J4 393 aa27.85■■■□□ 2.05
SSBP4-209ENST00000601357 ZNF512BQ96KM6 892 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-209ENST00000601357 DDX4Q9NQI0 724 aaKnown RBP27.85■■■□□ 2.05
SSBP4-209ENST00000601357 GSTO1P78417 241 aa27.84■■■□□ 2.05
SSBP4-209ENST00000601357 PPATQ06203 517 aa27.84■■■□□ 2.05
SSBP4-209ENST00000601357 NOL9Q5SY16 702 aaKnown RBP27.84■■■□□ 2.05
SSBP4-209ENST00000601357 HPS5Q9UPZ3 1129 aa27.84■■■□□ 2.05
SSBP4-209ENST00000601357 MAP3K10Q02779 954 aa27.83■■■□□ 2.05
SSBP4-209ENST00000601357 CCDC158Q5M9N0 1113 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms