RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 ARMC5Q96C12 935 aa23.5■■□□□ 1.35
FARP1-229ENST00000600190 IRF6O14896 467 aa23.49■■□□□ 1.35
FARP1-229ENST00000600190 MYH13Q9UKX3 1938 aa23.49■■□□□ 1.35
FARP1-229ENST00000600190 UBTFL1P0CB47 393 aaPredicted RBP23.48■■□□□ 1.35
FARP1-229ENST00000600190 SNAPC2Q13487 334 aa23.48■■□□□ 1.35
FARP1-229ENST00000600190 ZNF341Q9BYN7 854 aa23.48■■□□□ 1.35
FARP1-229ENST00000600190 BTBD19C9JJ37 291 aa23.47■■□□□ 1.35
FARP1-229ENST00000600190 TCP10Q12799 353 aa23.47■■□□□ 1.35
FARP1-229ENST00000600190 DIXDC1Q155Q3 683 aa23.47■■□□□ 1.35
FARP1-229ENST00000600190 CEP126Q9P2H0 1117 aa23.47■■□□□ 1.35
FARP1-229ENST00000600190 EN2P19622 333 aaPredicted RBP23.46■■□□□ 1.35
FARP1-229ENST00000600190 PPIL2Q13356 520 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 ATP2B3Q16720 1220 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 SLC9C1Q4G0N8 1177 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 CDC42EP5Q6NZY7 148 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 FAM151AQ8WW52 585 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 TMEM106CQ9BVX2 250 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 GNL3LQ9NVN8 582 aaKnown RBP23.46■■□□□ 1.35
FARP1-229ENST00000600190 NOB1Q9ULX3 412 aaKnown RBP23.46■■□□□ 1.35
FARP1-229ENST00000600190 DAGLAQ9Y4D2 1042 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 PTCH2Q9Y6C5 1203 aa23.46■■□□□ 1.35
FARP1-229ENST00000600190 RPAP1Q9BWH6 1393 aaPredicted RBP23.45■■□□□ 1.34
FARP1-229ENST00000600190 TLR2O60603 784 aa23.45■■□□□ 1.34
FARP1-229ENST00000600190 PRDX5P30044 214 aa23.45■■□□□ 1.34
FARP1-229ENST00000600190 INPP5BP32019 993 aa23.45■■□□□ 1.34
FARP1-229ENST00000600190 KIF22Q14807 665 aa23.45■■□□□ 1.34
FARP1-229ENST00000600190 NBPF11Q86T75 865 aa23.45■■□□□ 1.34
FARP1-229ENST00000600190 PCDH10Q9P2E7 1040 aa23.45■■□□□ 1.34
FARP1-229ENST00000600190 CIAO1O76071 339 aa23.44■■□□□ 1.34
FARP1-229ENST00000600190 LDHBP07195 334 aaKnown RBP23.44■■□□□ 1.34
FARP1-229ENST00000600190 PPATQ06203 517 aa23.44■■□□□ 1.34
FARP1-229ENST00000600190 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
FARP1-229ENST00000600190 ZNF333Q96JL9 665 aa23.44■■□□□ 1.34
FARP1-229ENST00000600190 ARHGAP39Q9C0H5 1083 aa23.44■■□□□ 1.34
FARP1-229ENST00000600190 ZCCHC17Q9NP64 241 aaKnown RBP23.44■■□□□ 1.34
FARP1-229ENST00000600190 FBXO3Q9UK99 471 aa23.44■■□□□ 1.34
FARP1-229ENST00000600190 AK9Q5TCS8 1911 aa23.43■■□□□ 1.34
FARP1-229ENST00000600190 RBBP6Q7Z6E9 1792 aaKnown RBP23.43■■□□□ 1.34
FARP1-229ENST00000600190 NFIAQ12857 509 aa23.43■■□□□ 1.34
FARP1-229ENST00000600190 USP40Q9NVE5 1235 aa23.43■■□□□ 1.34
FARP1-229ENST00000600190 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
FARP1-229ENST00000600190 ECM2O94769 699 aaPredicted RBP23.42■■□□□ 1.34
FARP1-229ENST00000600190 MYCP01106 439 aaPredicted RBP23.42■■□□□ 1.34
FARP1-229ENST00000600190 LACTBP83111 547 aaPredicted RBP23.42■■□□□ 1.34
FARP1-229ENST00000600190 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
FARP1-229ENST00000600190 DENND2AQ9ULE3 1009 aa23.42■■□□□ 1.34
FARP1-229ENST00000600190 PA2G4Q9UQ80 394 aaKnown RBP23.42■■□□□ 1.34
FARP1-229ENST00000600190 KIAA0100Q14667 2235 aaKnown RBP23.42■■□□□ 1.34
FARP1-229ENST00000600190 IL15P40933 162 aaPredicted RBP23.41■■□□□ 1.34
FARP1-229ENST00000600190 PHKA1P46020 1223 aa23.41■■□□□ 1.34
FARP1-229ENST00000600190 SLC4A8Q2Y0W8 1093 aa23.41■■□□□ 1.34
FARP1-229ENST00000600190 FAM198AQ9UFP1 575 aa23.41■■□□□ 1.34
FARP1-229ENST00000600190 HDAC5Q9UQL6 1122 aa23.41■■□□□ 1.34
FARP1-229ENST00000600190 GCC1Q96CN9 775 aa23.4■■□□□ 1.34
FARP1-229ENST00000600190 API5Q9BZZ5 524 aaKnown RBP23.4■■□□□ 1.34
FARP1-229ENST00000600190 ZNF112Q9UJU3 913 aa23.4■■□□□ 1.34
FARP1-229ENST00000600190 ZSWIM8A7E2V4 1837 aa23.39■■□□□ 1.33
FARP1-229ENST00000600190 SEMA3EO15041 775 aa23.39■■□□□ 1.33
FARP1-229ENST00000600190 ADORA1P30542 326 aa23.39■■□□□ 1.33
FARP1-229ENST00000600190 SH3TC2Q8TF17 1288 aa23.39■■□□□ 1.33
FARP1-229ENST00000600190 CPA4Q9UI42 421 aa23.39■■□□□ 1.33
FARP1-229ENST00000600190 SALL1Q9NSC2 1324 aa23.38■■□□□ 1.33
FARP1-229ENST00000600190 PDHXO00330 501 aa23.38■■□□□ 1.33
FARP1-229ENST00000600190 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
FARP1-229ENST00000600190 ANKRD23Q86SG2 305 aa23.38■■□□□ 1.33
FARP1-229ENST00000600190 ZFPM1Q8IX07 1006 aa23.38■■□□□ 1.33
FARP1-229ENST00000600190 GNRH1P01148 92 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 RARSP54136 660 aaKnown RBP23.37■■□□□ 1.33
FARP1-229ENST00000600190 TIMM10P62072 90 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 CCDC102BQ68D86 513 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 C17orf99Q6UX52 265 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 MEIS3Q99687 375 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 COPRSQ9NQ92 184 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 KCNH4Q9UQ05 1017 aa23.37■■□□□ 1.33
FARP1-229ENST00000600190 ZGPATQ8N5A5 531 aaKnown RBP23.36■■□□□ 1.33
FARP1-229ENST00000600190 PSMC4P43686 418 aa23.35■■□□□ 1.33
FARP1-229ENST00000600190 RGS3P49796 1198 aa23.35■■□□□ 1.33
FARP1-229ENST00000600190 NOL9Q5SY16 702 aaKnown RBP23.35■■□□□ 1.33
FARP1-229ENST00000600190 DZIP1Q86YF9 867 aaKnown RBP23.35■■□□□ 1.33
FARP1-229ENST00000600190 ABCF2Q9UG63 623 aa23.35■■□□□ 1.33
FARP1-229ENST00000600190 PRMT2P55345 433 aa23.34■■□□□ 1.33
FARP1-229ENST00000600190 ZSCAN29Q8IWY8 852 aaPredicted RBP23.34■■□□□ 1.33
FARP1-229ENST00000600190 MYH2Q9UKX2 1941 aa23.33■■□□□ 1.33
FARP1-229ENST00000600190 FMNL1O95466 1100 aaPredicted RBP23.33■■□□□ 1.33
FARP1-229ENST00000600190 CTGFP29279 349 aa23.33■■□□□ 1.33
FARP1-229ENST00000600190 MOGSQ13724 837 aa23.33■■□□□ 1.33
FARP1-229ENST00000600190 RASGRF1Q13972 1273 aa23.33■■□□□ 1.33
FARP1-229ENST00000600190 IDI2Q9BXS1 227 aa23.33■■□□□ 1.33
FARP1-229ENST00000600190 SRGAP3O43295 1099 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 ENTPD3O75355 529 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 HABP4Q5JVS0 413 aaKnown RBP23.32■■□□□ 1.32
FARP1-229ENST00000600190 SLF2Q8IX21 1173 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 TRIM47Q96LD4 638 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 PICK1Q9NRD5 415 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 ZHX2Q9Y6X8 837 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 GAKO14976 1311 aa23.32■■□□□ 1.32
FARP1-229ENST00000600190 A0A1B0GUL7 405 aa23.31■■□□□ 1.32
FARP1-229ENST00000600190 PHF20L1A8MW92 1017 aa23.31■■□□□ 1.32
FARP1-229ENST00000600190 CXCL11O14625 94 aa23.31■■□□□ 1.32
FARP1-229ENST00000600190 HOXD10P28358 340 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms