RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 POLA2Q14181 598 aa17■□□□□ 0.31
SCAF1-203ENST00000598359 PPP1R3FQ6ZSY5 799 aaPredicted RBP17■□□□□ 0.31
SCAF1-203ENST00000598359 ABCF2Q9UG63 623 aa17■□□□□ 0.31
SCAF1-203ENST00000598359 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
SCAF1-203ENST00000598359 NFIAQ12857 509 aa16.99■□□□□ 0.31
SCAF1-203ENST00000598359 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
SCAF1-203ENST00000598359 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
SCAF1-203ENST00000598359 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
SCAF1-203ENST00000598359 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
SCAF1-203ENST00000598359 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
SCAF1-203ENST00000598359 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCAF1-203ENST00000598359 ZBTB48P10074 688 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-203ENST00000598359 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-203ENST00000598359 VGLL4Q14135 290 aa16.98■□□□□ 0.31
SCAF1-203ENST00000598359 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
SCAF1-203ENST00000598359 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
SCAF1-203ENST00000598359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCAF1-203ENST00000598359 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
SCAF1-203ENST00000598359 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
SCAF1-203ENST00000598359 SURF6O75683 361 aaKnown RBP16.97■□□□□ 0.31
SCAF1-203ENST00000598359 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
SCAF1-203ENST00000598359 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
SCAF1-203ENST00000598359 MIGA2Q7L4E1 593 aa16.97■□□□□ 0.31
SCAF1-203ENST00000598359 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
SCAF1-203ENST00000598359 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
SCAF1-203ENST00000598359 ZFPM1Q8IX07 1006 aa16.97■□□□□ 0.31
SCAF1-203ENST00000598359 ZNF296Q8WUU4 475 aaPredicted RBP16.97■□□□□ 0.31
SCAF1-203ENST00000598359 FAM198AQ9UFP1 575 aa16.97■□□□□ 0.31
SCAF1-203ENST00000598359 UNCXA6NJT0 531 aa16.96■□□□□ 0.31
SCAF1-203ENST00000598359 GPR25O00155 361 aa16.96■□□□□ 0.31
SCAF1-203ENST00000598359 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
SCAF1-203ENST00000598359 FAM151AQ8WW52 585 aa16.96■□□□□ 0.31
SCAF1-203ENST00000598359 ZKSCAN4Q969J2 545 aaPredicted RBP16.96■□□□□ 0.31
SCAF1-203ENST00000598359 WRNIP1Q96S55 665 aa16.96■□□□□ 0.31
SCAF1-203ENST00000598359 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.3
SCAF1-203ENST00000598359 MCAMP43121 646 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 MECOMQ03112 1051 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
SCAF1-203ENST00000598359 SPATA5Q8NB90 893 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 PTPN18Q99952 460 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 CSADQ9Y600 493 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 GAKO14976 1311 aa16.95■□□□□ 0.3
SCAF1-203ENST00000598359 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
SCAF1-203ENST00000598359 RPAP1Q9BWH6 1393 aaPredicted RBP16.94■□□□□ 0.3
SCAF1-203ENST00000598359 ZBTB22O15209 634 aa16.94■□□□□ 0.3
SCAF1-203ENST00000598359 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
SCAF1-203ENST00000598359 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
SCAF1-203ENST00000598359 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
SCAF1-203ENST00000598359 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 INPP5BP32019 993 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 BTDP43251 543 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 RGS3P49796 1198 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 INHBEP58166 350 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 SPTY2D1Q68D10 685 aaPredicted RBP16.93■□□□□ 0.3
SCAF1-203ENST00000598359 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 BRI3BPQ8WY22 251 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
SCAF1-203ENST00000598359 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
SCAF1-203ENST00000598359 PICALMQ13492 652 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 TTC39AQ5SRH9 613 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 DCAF15Q66K64 600 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 ZNF341Q9BYN7 854 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-203ENST00000598359 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 DDX4Q9NQI0 724 aaKnown RBP16.92■□□□□ 0.3
SCAF1-203ENST00000598359 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
SCAF1-203ENST00000598359 LAMB1P07942 1786 aa16.92■□□□□ 0.3
SCAF1-203ENST00000598359 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 TESPA1A2RU30 521 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-203ENST00000598359 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 FKTNO75072 461 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-203ENST00000598359 ALDH1A1P00352 501 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 UQCRFS1P1P0C7P4 283 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 CRHR2Q13324 411 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 CCL15Q16663 113 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 NSUN4Q96CB9 384 aaKnown RBP16.91■□□□□ 0.3
SCAF1-203ENST00000598359 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
SCAF1-203ENST00000598359 RHBDL3P58872 404 aa16.9■□□□□ 0.3
SCAF1-203ENST00000598359 SLF2Q8IX21 1173 aa16.9■□□□□ 0.3
SCAF1-203ENST00000598359 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
SCAF1-203ENST00000598359 GCC1Q96CN9 775 aa16.9■□□□□ 0.3
SCAF1-203ENST00000598359 FAM163AQ96GL9 167 aaPredicted RBP16.9■□□□□ 0.3
SCAF1-203ENST00000598359 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
SCAF1-203ENST00000598359 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms