RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 APOBEC3HQ6NTF7 200 aaKnown RBP16.69■□□□□ 0.26
TMEM38A-202ENST00000595452 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
TMEM38A-202ENST00000595452 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
TMEM38A-202ENST00000595452 UBE2Q2LH0YL09 131 aa16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 CTCFP49711 727 aaPredicted RBP16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 DCAF15Q66K64 600 aa16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 LRRCC1Q9C099 1032 aa16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 WBP1LQ9NX94 342 aa16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 GAKO14976 1311 aa16.68■□□□□ 0.26
TMEM38A-202ENST00000595452 AOC2O75106 756 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 CACNB3P54284 484 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 MECOMQ03112 1051 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 AAMPQ13685 434 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 MAP3K11Q16584 847 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 TMED8Q6PL24 325 aaPredicted RBP16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 RASAL3Q86YV0 1011 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 TMEM39BQ9GZU3 492 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 DOCK2Q92608 1830 aa16.67■□□□□ 0.26
TMEM38A-202ENST00000595452 SSC5DA1L4H1 1573 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 BAG3O95817 575 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 BTDP43251 543 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 PI16Q6UXB8 463 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 FAM151AQ8WW52 585 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 SNRKQ9NRH2 765 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 TLR7Q9NYK1 1049 aaKnown RBP16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 CSADQ9Y600 493 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 AOX1Q06278 1338 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 OTOFQ9HC10 1997 aa16.66■□□□□ 0.26
TMEM38A-202ENST00000595452 FAM155AB1AL88 458 aaPredicted RBP16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 PLCG2P16885 1265 aa16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 SREBF2Q12772 1141 aa16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
TMEM38A-202ENST00000595452 ENTPD3O75355 529 aa16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 ZAP70P43403 619 aa16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 KIF23Q02241 960 aaPredicted RBP16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 MAP3K12Q12852 859 aa16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 ZSCAN29Q8IWY8 852 aaPredicted RBP16.64■□□□□ 0.25
TMEM38A-202ENST00000595452 MYO5AQ9Y4I1 1855 aaKnown RBP16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 GPR75-ASB3A0A0A6YYF3 556 aa16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 FOXN1O15353 648 aa16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 IDH1O75874 414 aaKnown RBP16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 ZBTB48P10074 688 aaPredicted RBP16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 TCP10Q12799 353 aa16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 TEPSINQ96N21 525 aa16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
TMEM38A-202ENST00000595452 LAMB1P07942 1786 aa16.62■□□□□ 0.25
TMEM38A-202ENST00000595452 CYP2E1P05181 493 aaPredicted RBP16.62■□□□□ 0.25
TMEM38A-202ENST00000595452 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
TMEM38A-202ENST00000595452 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
TMEM38A-202ENST00000595452 PRDM10Q9NQV6 1147 aa16.62■□□□□ 0.25
TMEM38A-202ENST00000595452 SAGE1Q9NXZ1 904 aa16.62■□□□□ 0.25
TMEM38A-202ENST00000595452 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 USP2O75604 605 aaPredicted RBP16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 RGS3P49796 1198 aa16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 INHBEP58166 350 aa16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 PICALMQ13492 652 aa16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 WRNIP1Q96S55 665 aa16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 CSRNP1Q96S65 589 aa16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
TMEM38A-202ENST00000595452 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 NFIAQ12857 509 aa16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 SPRYD7Q5W111 196 aa16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 FOCADQ5VW36 1801 aa16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 COL2A1P02458 1487 aaPredicted RBP16.6■□□□□ 0.25
TMEM38A-202ENST00000595452 MYH7P12883 1935 aa16.59■□□□□ 0.25
TMEM38A-202ENST00000595452 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
TMEM38A-202ENST00000595452 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM38A-202ENST00000595452 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
TMEM38A-202ENST00000595452 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
TMEM38A-202ENST00000595452 RFX7Q2KHR2 1363 aa16.59■□□□□ 0.25
TMEM38A-202ENST00000595452 ALDH1A1P00352 501 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 ATP5JP18859 108 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 CYP7A1P22680 504 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 LBX1P52954 281 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 MKRN3Q13064 507 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms