RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 SLC4A8Q2Y0W8 1093 aa23.34■■□□□ 1.33
PDE4C-208ENST00000595343 MIGA2Q7L4E1 593 aa23.34■■□□□ 1.33
PDE4C-208ENST00000595343 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
PDE4C-208ENST00000595343 ZSWIM8A7E2V4 1837 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 EYA2O00167 538 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 SLC5A1P13866 664 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 RFX5P48382 616 aaPredicted RBP23.32■■□□□ 1.32
PDE4C-208ENST00000595343 PPATQ06203 517 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 WDR66Q8TBY9 1149 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 SSH1Q8WYL5 1049 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 LPIN2Q92539 896 aa23.32■■□□□ 1.32
PDE4C-208ENST00000595343 MYCP01106 439 aaPredicted RBP23.31■■□□□ 1.32
PDE4C-208ENST00000595343 GNRH1P01148 92 aa23.31■■□□□ 1.32
PDE4C-208ENST00000595343 INPP5BP32019 993 aa23.31■■□□□ 1.32
PDE4C-208ENST00000595343 SH3TC2Q8TF17 1288 aa23.31■■□□□ 1.32
PDE4C-208ENST00000595343 FAM151AQ8WW52 585 aa23.31■■□□□ 1.32
PDE4C-208ENST00000595343 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
PDE4C-208ENST00000595343 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
PDE4C-208ENST00000595343 DAGLAQ9Y4D2 1042 aa23.3■■□□□ 1.32
PDE4C-208ENST00000595343 CDC42EP5Q6NZY7 148 aa23.29■■□□□ 1.32
PDE4C-208ENST00000595343 C17orf99Q6UX52 265 aa23.29■■□□□ 1.32
PDE4C-208ENST00000595343 ATG9AQ7Z3C6 839 aa23.29■■□□□ 1.32
PDE4C-208ENST00000595343 ZNF112Q9UJU3 913 aa23.29■■□□□ 1.32
PDE4C-208ENST00000595343 MYH13Q9UKX3 1938 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 PRMT2P55345 433 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 TCP10Q12799 353 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 DIXDC1Q155Q3 683 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 ANKRD23Q86SG2 305 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 CPA4Q9UI42 421 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 KCNH4Q9UQ05 1017 aa23.28■■□□□ 1.32
PDE4C-208ENST00000595343 PDHXO00330 501 aa23.27■■□□□ 1.32
PDE4C-208ENST00000595343 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
PDE4C-208ENST00000595343 NFIAQ12857 509 aa23.27■■□□□ 1.32
PDE4C-208ENST00000595343 CEP290O15078 2479 aa23.26■■□□□ 1.31
PDE4C-208ENST00000595343 E9PSI1 815 aa23.26■■□□□ 1.31
PDE4C-208ENST00000595343 CTGFP29279 349 aa23.26■■□□□ 1.31
PDE4C-208ENST00000595343 PRDX5P30044 214 aa23.26■■□□□ 1.31
PDE4C-208ENST00000595343 PSMC4P43686 418 aa23.25■■□□□ 1.31
PDE4C-208ENST00000595343 NOL9Q5SY16 702 aaKnown RBP23.25■■□□□ 1.31
PDE4C-208ENST00000595343 TRIM47Q96LD4 638 aa23.25■■□□□ 1.31
PDE4C-208ENST00000595343 FAM198AQ9UFP1 575 aa23.25■■□□□ 1.31
PDE4C-208ENST00000595343 LDHBP07195 334 aaKnown RBP23.24■■□□□ 1.31
PDE4C-208ENST00000595343 MOGSQ13724 837 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 ATP2B3Q16720 1220 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 SIL1Q9H173 461 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 USP40Q9NVE5 1235 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 SRRDQ9UH36 339 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 FBXO3Q9UK99 471 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 ADGRA2Q96PE1 1338 aa23.24■■□□□ 1.31
PDE4C-208ENST00000595343 AK9Q5TCS8 1911 aa23.23■■□□□ 1.31
PDE4C-208ENST00000595343 CIAO1O76071 339 aa23.23■■□□□ 1.31
PDE4C-208ENST00000595343 FXR1P51114 621 aaKnown RBP eCLIP23.23■■□□□ 1.31
PDE4C-208ENST00000595343 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
PDE4C-208ENST00000595343 GNL3LQ9NVN8 582 aaKnown RBP23.23■■□□□ 1.31
PDE4C-208ENST00000595343 CEP126Q9P2H0 1117 aa23.23■■□□□ 1.31
PDE4C-208ENST00000595343 COLQQ9Y215 455 aaPredicted RBP23.23■■□□□ 1.31
PDE4C-208ENST00000595343 OSBPP22059 807 aa23.22■■□□□ 1.31
PDE4C-208ENST00000595343 HOXD10P28358 340 aa23.22■■□□□ 1.31
PDE4C-208ENST00000595343 SLFN5Q08AF3 891 aa23.22■■□□□ 1.31
PDE4C-208ENST00000595343 MTFR1Q15390 333 aa23.22■■□□□ 1.31
PDE4C-208ENST00000595343 ZFPM1Q8IX07 1006 aa23.22■■□□□ 1.31
PDE4C-208ENST00000595343 SALL1Q9NSC2 1324 aa23.22■■□□□ 1.31
PDE4C-208ENST00000595343 FMNL1O95466 1100 aaPredicted RBP23.21■■□□□ 1.31
PDE4C-208ENST00000595343 UBTFL1P0CB47 393 aaPredicted RBP23.21■■□□□ 1.31
PDE4C-208ENST00000595343 DENND2AQ9ULE3 1009 aa23.21■■□□□ 1.31
PDE4C-208ENST00000595343 H0YGN5 161 aa23.2■■□□□ 1.3
PDE4C-208ENST00000595343 SEMA3EO15041 775 aa23.2■■□□□ 1.3
PDE4C-208ENST00000595343 PHKA1P46020 1223 aa23.2■■□□□ 1.3
PDE4C-208ENST00000595343 RAET1EQ8TD07 263 aa23.2■■□□□ 1.3
PDE4C-208ENST00000595343 SHISA4Q96DD7 197 aa23.2■■□□□ 1.3
PDE4C-208ENST00000595343 SMC4Q9NTJ3 1288 aa23.2■■□□□ 1.3
PDE4C-208ENST00000595343 CXCL11O14625 94 aa23.19■■□□□ 1.3
PDE4C-208ENST00000595343 GRK4P32298 578 aa23.19■■□□□ 1.3
PDE4C-208ENST00000595343 GPAT2Q6NUI2 795 aa23.19■■□□□ 1.3
PDE4C-208ENST00000595343 PARK7Q99497 189 aaKnown RBP23.19■■□□□ 1.3
PDE4C-208ENST00000595343 ATRNL1Q5VV63 1379 aa23.18■■□□□ 1.3
PDE4C-208ENST00000595343 MYPNQ86TC9 1320 aa23.18■■□□□ 1.3
PDE4C-208ENST00000595343 PHF20L1A8MW92 1017 aa23.18■■□□□ 1.3
PDE4C-208ENST00000595343 IL15P40933 162 aaPredicted RBP23.18■■□□□ 1.3
PDE4C-208ENST00000595343 TRIOBPQ9H2D6 2365 aa23.18■■□□□ 1.3
PDE4C-208ENST00000595343 CYP2C8P10632 490 aa23.17■■□□□ 1.3
PDE4C-208ENST00000595343 BCRP11274 1271 aa23.17■■□□□ 1.3
PDE4C-208ENST00000595343 RGS3P49796 1198 aa23.17■■□□□ 1.3
PDE4C-208ENST00000595343 SCYL3Q8IZE3 742 aa23.17■■□□□ 1.3
PDE4C-208ENST00000595343 IDI2Q9BXS1 227 aa23.17■■□□□ 1.3
PDE4C-208ENST00000595343 PA2G4Q9UQ80 394 aaKnown RBP23.17■■□□□ 1.3
PDE4C-208ENST00000595343 GAKO14976 1311 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 ZBTB22O15209 634 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 ENTPD3O75355 529 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 CCDC102BQ68D86 513 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 ZGPATQ8N5A5 531 aaKnown RBP23.16■■□□□ 1.3
PDE4C-208ENST00000595343 NKX2-3Q8TAU0 364 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 CDCA7LQ96GN5 454 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 PICK1Q9NRD5 415 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 LRRFIP2Q9Y608 721 aaKnown RBP23.16■■□□□ 1.3
PDE4C-208ENST00000595343 ZHX2Q9Y6X8 837 aa23.16■■□□□ 1.3
PDE4C-208ENST00000595343 CCL5P13501 91 aa23.15■■□□□ 1.3
PDE4C-208ENST00000595343 PTPRAP18433 802 aa23.15■■□□□ 1.3
PDE4C-208ENST00000595343 ADORA1P30542 326 aa23.15■■□□□ 1.3
PDE4C-208ENST00000595343 FCGRTP55899 365 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms