RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SLC34A2O95436 690 aa27.08■■□□□ 1.93
DDX39A-215ENST00000590696 MIGA2Q7L4E1 593 aa27.08■■□□□ 1.93
DDX39A-215ENST00000590696 ERO1BQ86YB8 467 aa27.08■■□□□ 1.93
DDX39A-215ENST00000590696 FAM151AQ8WW52 585 aa27.08■■□□□ 1.93
DDX39A-215ENST00000590696 LDHBP07195 334 aaKnown RBP27.07■■□□□ 1.92
DDX39A-215ENST00000590696 PHKA1P46020 1223 aa27.07■■□□□ 1.92
DDX39A-215ENST00000590696 CAP1Q01518 475 aa27.07■■□□□ 1.92
DDX39A-215ENST00000590696 CDC42EP5Q6NZY7 148 aa27.07■■□□□ 1.92
DDX39A-215ENST00000590696 ZNF341Q9BYN7 854 aa27.07■■□□□ 1.92
DDX39A-215ENST00000590696 COPRSQ9NQ92 184 aa27.07■■□□□ 1.92
DDX39A-215ENST00000590696 DENND2AQ9ULE3 1009 aa27.07■■□□□ 1.92
DDX39A-215ENST00000590696 TCP10Q12799 353 aa27.06■■□□□ 1.92
DDX39A-215ENST00000590696 IRF6O14896 467 aa27.05■■□□□ 1.92
DDX39A-215ENST00000590696 SEMA3EO15041 775 aa27.05■■□□□ 1.92
DDX39A-215ENST00000590696 CETPP11597 493 aa27.05■■□□□ 1.92
DDX39A-215ENST00000590696 INTS3Q68E01 1043 aaKnown RBP27.05■■□□□ 1.92
DDX39A-215ENST00000590696 ARHGAP45Q92619 1136 aa27.05■■□□□ 1.92
DDX39A-215ENST00000590696 SALL1Q9NSC2 1324 aa27.05■■□□□ 1.92
DDX39A-215ENST00000590696 PDE4DIPQ5VU43 2346 aa27.04■■□□□ 1.92
DDX39A-215ENST00000590696 ADORA1P30542 326 aa27.04■■□□□ 1.92
DDX39A-215ENST00000590696 NFIAQ12857 509 aa27.04■■□□□ 1.92
DDX39A-215ENST00000590696 PPIL2Q13356 520 aa27.04■■□□□ 1.92
DDX39A-215ENST00000590696 USP40Q9NVE5 1235 aa27.04■■□□□ 1.92
DDX39A-215ENST00000590696 HTTP42858 3142 aa27.04■■□□□ 1.92
DDX39A-215ENST00000590696 INPP5BP32019 993 aa27.03■■□□□ 1.92
DDX39A-215ENST00000590696 SNAPC2Q13487 334 aa27.03■■□□□ 1.92
DDX39A-215ENST00000590696 CCDC102BQ68D86 513 aa27.03■■□□□ 1.92
DDX39A-215ENST00000590696 BTBD19C9JJ37 291 aa27.02■■□□□ 1.92
DDX39A-215ENST00000590696 WDHD1O75717 1129 aaPredicted RBP27.02■■□□□ 1.92
DDX39A-215ENST00000590696 GNAI3P08754 354 aa27.02■■□□□ 1.92
DDX39A-215ENST00000590696 TIMM10P62072 90 aa27.02■■□□□ 1.92
DDX39A-215ENST00000590696 FAM198AQ9UFP1 575 aa27.02■■□□□ 1.92
DDX39A-215ENST00000590696 PPATQ06203 517 aa27.01■■□□□ 1.91
DDX39A-215ENST00000590696 ARHGEF6Q15052 776 aa27.01■■□□□ 1.91
DDX39A-215ENST00000590696 PRPF38BQ5VTL8 546 aaKnown RBP27.01■■□□□ 1.91
DDX39A-215ENST00000590696 ZCCHC17Q9NP64 241 aaKnown RBP27.01■■□□□ 1.91
DDX39A-215ENST00000590696 ZNF112Q9UJU3 913 aa27.01■■□□□ 1.91
DDX39A-215ENST00000590696 POTEFA5A3E0 1075 aa27■■□□□ 1.91
DDX39A-215ENST00000590696 ZBTB22O15209 634 aa27■■□□□ 1.91
DDX39A-215ENST00000590696 SRGAP3O43295 1099 aa27■■□□□ 1.91
DDX39A-215ENST00000590696 ZGPATQ8N5A5 531 aaKnown RBP27■■□□□ 1.91
DDX39A-215ENST00000590696 AK9Q5TCS8 1911 aa27■■□□□ 1.91
DDX39A-215ENST00000590696 TLR2O60603 784 aa26.99■■□□□ 1.91
DDX39A-215ENST00000590696 ARMC5Q96C12 935 aa26.99■■□□□ 1.91
DDX39A-215ENST00000590696 TFCP2Q12800 502 aa26.98■■□□□ 1.91
DDX39A-215ENST00000590696 RASGRF1Q13972 1273 aa26.98■■□□□ 1.91
DDX39A-215ENST00000590696 ZFPM1Q8IX07 1006 aa26.98■■□□□ 1.91
DDX39A-215ENST00000590696 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.98■■□□□ 1.91
DDX39A-215ENST00000590696 A0A1B0GUL7 405 aa26.97■■□□□ 1.91
DDX39A-215ENST00000590696 MTX1Q13505 466 aa26.97■■□□□ 1.91
DDX39A-215ENST00000590696 XAGE2Q96GT9 111 aa26.97■■□□□ 1.91
DDX39A-215ENST00000590696 ABCF2Q9UG63 623 aa26.97■■□□□ 1.91
DDX39A-215ENST00000590696 AKAP2Q9Y2D5 859 aa26.97■■□□□ 1.91
DDX39A-215ENST00000590696 IPO8O15397 1037 aaKnown RBP26.96■■□□□ 1.91
DDX39A-215ENST00000590696 DZIP1Q86YF9 867 aaKnown RBP26.96■■□□□ 1.91
DDX39A-215ENST00000590696 PTCH2Q9Y6C5 1203 aa26.96■■□□□ 1.91
DDX39A-215ENST00000590696 GAKO14976 1311 aa26.95■■□□□ 1.91
DDX39A-215ENST00000590696 MYH2Q9UKX2 1941 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 TRIM27P14373 513 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 RGS3P49796 1198 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 KIF22Q14807 665 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 NOL9Q5SY16 702 aaKnown RBP26.95■■□□□ 1.9
DDX39A-215ENST00000590696 FRAT1Q92837 279 aaPredicted RBP26.95■■□□□ 1.9
DDX39A-215ENST00000590696 IDI2Q9BXS1 227 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 TNNQ9UQP3 1299 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 CENPFP49454 3210 aa26.95■■□□□ 1.9
DDX39A-215ENST00000590696 PDS5AQ29RF7 1337 aaKnown RBP26.94■■□□□ 1.9
DDX39A-215ENST00000590696 BCAR3O75815 825 aa26.94■■□□□ 1.9
DDX39A-215ENST00000590696 SLF2Q8IX21 1173 aa26.94■■□□□ 1.9
DDX39A-215ENST00000590696 NEUROD6Q96NK8 337 aa26.94■■□□□ 1.9
DDX39A-215ENST00000590696 ARHGAP39Q9C0H5 1083 aa26.94■■□□□ 1.9
DDX39A-215ENST00000590696 KCNH4Q9UQ05 1017 aa26.94■■□□□ 1.9
DDX39A-215ENST00000590696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.94■■□□□ 1.9
DDX39A-215ENST00000590696 ENTPD3O75355 529 aa26.93■■□□□ 1.9
DDX39A-215ENST00000590696 LACTBP83111 547 aaPredicted RBP26.93■■□□□ 1.9
DDX39A-215ENST00000590696 MVPQ14764 893 aaKnown RBP26.93■■□□□ 1.9
DDX39A-215ENST00000590696 SLC9C1Q4G0N8 1177 aa26.93■■□□□ 1.9
DDX39A-215ENST00000590696 SPTY2D1Q68D10 685 aaPredicted RBP26.93■■□□□ 1.9
DDX39A-215ENST00000590696 ATF7IPQ6VMQ6 1270 aa26.93■■□□□ 1.9
DDX39A-215ENST00000590696 ANKRD23Q86SG2 305 aa26.93■■□□□ 1.9
DDX39A-215ENST00000590696 PDHXO00330 501 aa26.92■■□□□ 1.9
DDX39A-215ENST00000590696 NBPF11Q86T75 865 aa26.92■■□□□ 1.9
DDX39A-215ENST00000590696 FAM163AQ96GL9 167 aaPredicted RBP26.92■■□□□ 1.9
DDX39A-215ENST00000590696 ZNF333Q96JL9 665 aa26.92■■□□□ 1.9
DDX39A-215ENST00000590696 RBBP6Q7Z6E9 1792 aaKnown RBP26.92■■□□□ 1.9
DDX39A-215ENST00000590696 GNAI2P04899 355 aa26.91■■□□□ 1.9
DDX39A-215ENST00000590696 EN2P19622 333 aaPredicted RBP26.91■■□□□ 1.9
DDX39A-215ENST00000590696 C17orf99Q6UX52 265 aa26.91■■□□□ 1.9
DDX39A-215ENST00000590696 ZSCAN29Q8IWY8 852 aaPredicted RBP26.91■■□□□ 1.9
DDX39A-215ENST00000590696 CLUAP1Q96AJ1 413 aa26.91■■□□□ 1.9
DDX39A-215ENST00000590696 TMEM106CQ9BVX2 250 aa26.91■■□□□ 1.9
DDX39A-215ENST00000590696 CPA4Q9UI42 421 aa26.91■■□□□ 1.9
DDX39A-215ENST00000590696 ATRNL1Q5VV63 1379 aa26.91■■□□□ 1.9
DDX39A-215ENST00000590696 ZSWIM8A7E2V4 1837 aa26.9■■□□□ 1.9
DDX39A-215ENST00000590696 PHF20L1A8MW92 1017 aa26.9■■□□□ 1.9
DDX39A-215ENST00000590696 BTDP43251 543 aa26.9■■□□□ 1.9
DDX39A-215ENST00000590696 MOGSQ13724 837 aa26.9■■□□□ 1.9
DDX39A-215ENST00000590696 ERICH6Q7L0X2 663 aa26.9■■□□□ 1.9
DDX39A-215ENST00000590696 SH3BP5LQ7L8J4 393 aa26.9■■□□□ 1.9
DDX39A-215ENST00000590696 RFX7Q2KHR2 1363 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms