RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ZNF804AQ7Z570 1209 aa20.17■□□□□ 0.82
GCDH-213ENST00000590627 GNL3LQ9NVN8 582 aaKnown RBP20.17■□□□□ 0.82
GCDH-213ENST00000590627 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 SEMA3EO15041 775 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 IL1R1P14778 569 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 DLGAP5Q15398 846 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
GCDH-213ENST00000590627 BMP2KLQ5H9B9 411 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 VPS37DQ86XT2 251 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 HAUS7Q99871 368 aa20.16■□□□□ 0.82
GCDH-213ENST00000590627 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
GCDH-213ENST00000590627 SREBF2Q12772 1141 aa20.15■□□□□ 0.82
GCDH-213ENST00000590627 LDLRAD1Q5T700 205 aa20.15■□□□□ 0.82
GCDH-213ENST00000590627 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
GCDH-213ENST00000590627 TDRD7Q8NHU6 1098 aaKnown RBP20.15■□□□□ 0.82
GCDH-213ENST00000590627 PPP2R3BQ9Y5P8 575 aa20.15■□□□□ 0.82
GCDH-213ENST00000590627 PDS5AQ29RF7 1337 aaKnown RBP20.14■□□□□ 0.81
GCDH-213ENST00000590627 PKN2Q16513 984 aaKnown RBP20.14■□□□□ 0.81
GCDH-213ENST00000590627 CFHR5Q9BXR6 569 aa20.14■□□□□ 0.81
GCDH-213ENST00000590627 DEFB129Q9H1M3 183 aa20.14■□□□□ 0.81
GCDH-213ENST00000590627 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
GCDH-213ENST00000590627 MCAMP43121 646 aa20.13■□□□□ 0.81
GCDH-213ENST00000590627 RASGRF1Q13972 1273 aa20.13■□□□□ 0.81
GCDH-213ENST00000590627 ZNF296Q8WUU4 475 aaPredicted RBP20.13■□□□□ 0.81
GCDH-213ENST00000590627 ANGEL1Q9UNK9 670 aaKnown RBP20.13■□□□□ 0.81
GCDH-213ENST00000590627 MYO1BO43795 1136 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 TBC1D8O95759 1140 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 PRKG1Q13976 671 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 MAP3K11Q16584 847 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 SPATA5Q8NB90 893 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 HMG20BQ9P0W2 317 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 DENND2AQ9ULE3 1009 aa20.12■□□□□ 0.81
GCDH-213ENST00000590627 SPDYE2BA6NHP3 402 aa20.11■□□□□ 0.81
GCDH-213ENST00000590627 UNCXA6NJT0 531 aa20.11■□□□□ 0.81
GCDH-213ENST00000590627 PPP1R12BO60237 982 aaPredicted RBP20.11■□□□□ 0.81
GCDH-213ENST00000590627 SPDYE6P0CI01 402 aa20.11■□□□□ 0.81
GCDH-213ENST00000590627 CFAP100Q494V2 611 aa20.11■□□□□ 0.81
GCDH-213ENST00000590627 SPRYD7Q5W111 196 aa20.11■□□□□ 0.81
GCDH-213ENST00000590627 TNRC18O15417 2968 aaPredicted RBP20.1■□□□□ 0.81
GCDH-213ENST00000590627 GPR25O00155 361 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 ALDH1A1P00352 501 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 SDSP20132 328 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 INHBEP58166 350 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 MKRN3Q13064 507 aaKnown RBP20.1■□□□□ 0.81
GCDH-213ENST00000590627 TICAM2Q86XR7 235 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 EVI5LQ96CN4 794 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 PDE4DIPQ5VU43 2346 aa20.1■□□□□ 0.81
GCDH-213ENST00000590627 FAM205AQ6ZU69 1335 aa20.09■□□□□ 0.81
GCDH-213ENST00000590627 F8W031 263 aaPredicted RBP20.09■□□□□ 0.81
GCDH-213ENST00000590627 ZAP70P43403 619 aa20.09■□□□□ 0.81
GCDH-213ENST00000590627 SUPT20HL1Q3ZLR7 823 aa20.09■□□□□ 0.81
GCDH-213ENST00000590627 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
GCDH-213ENST00000590627 DNAJC2Q99543 621 aaKnown RBP20.09■□□□□ 0.81
GCDH-213ENST00000590627 SNRKQ9NRH2 765 aa20.09■□□□□ 0.81
GCDH-213ENST00000590627 PAG1Q9NWQ8 432 aa20.09■□□□□ 0.81
GCDH-213ENST00000590627 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
GCDH-213ENST00000590627 SSC5DA1L4H1 1573 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 LAMB1P07942 1786 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 MANSC4A6NHS7 340 aaPredicted RBP20.08■□□□□ 0.81
GCDH-213ENST00000590627 SLC34A2O95436 690 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 CYP2E1P05181 493 aaPredicted RBP20.08■□□□□ 0.81
GCDH-213ENST00000590627 ZBTB48P10074 688 aaPredicted RBP20.08■□□□□ 0.81
GCDH-213ENST00000590627 SOX10P56693 466 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 TTF1Q15361 905 aaPredicted RBP20.08■□□□□ 0.81
GCDH-213ENST00000590627 PI16Q6UXB8 463 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 SLC10A4Q96EP9 437 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 IQSEC3Q9UPP2 1182 aaPredicted RBP20.08■□□□□ 0.81
GCDH-213ENST00000590627 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
GCDH-213ENST00000590627 CLRN2A0PK11 232 aa20.07■□□□□ 0.8
GCDH-213ENST00000590627 TRIM6-TRIM34B2RNG4 842 aa20.07■□□□□ 0.8
GCDH-213ENST00000590627 GOLIM4O00461 696 aa20.07■□□□□ 0.8
GCDH-213ENST00000590627 FRAT2O75474 233 aaPredicted RBP20.07■□□□□ 0.8
GCDH-213ENST00000590627 NDUFB9Q9Y6M9 179 aa20.07■□□□□ 0.8
GCDH-213ENST00000590627 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 IGSF3O75054 1194 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 FKTNO75072 461 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 MAP4K4O95819 1239 aaPredicted RBP20.06■□□□□ 0.8
GCDH-213ENST00000590627 KBTBD3Q8NAB2 608 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 WDR66Q8TBY9 1149 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
GCDH-213ENST00000590627 ANTXR1Q9H6X2 564 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 VEZTQ9HBM0 779 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 FZD1Q9UP38 647 aa20.06■□□□□ 0.8
GCDH-213ENST00000590627 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
GCDH-213ENST00000590627 MFSD14BQ5SR56 506 aa20.05■□□□□ 0.8
GCDH-213ENST00000590627 FBXO46Q6PJ61 603 aaPredicted RBP20.05■□□□□ 0.8
GCDH-213ENST00000590627 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
GCDH-213ENST00000590627 WNK4Q96J92 1243 aa20.05■□□□□ 0.8
GCDH-213ENST00000590627 SERPINA10Q9UK55 444 aa20.05■□□□□ 0.8
GCDH-213ENST00000590627 JAG2Q9Y219 1238 aa20.05■□□□□ 0.8
GCDH-213ENST00000590627 RFX7Q2KHR2 1363 aa20.05■□□□□ 0.8
GCDH-213ENST00000590627 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
GCDH-213ENST00000590627 TNFAIP1Q13829 316 aa20.04■□□□□ 0.8
GCDH-213ENST00000590627 RASA3Q14644 834 aa20.04■□□□□ 0.8
GCDH-213ENST00000590627 NBPF12Q5TAG4 269 aaPredicted RBP20.04■□□□□ 0.8
GCDH-213ENST00000590627 ZGPATQ8N5A5 531 aaKnown RBP20.04■□□□□ 0.8
GCDH-213ENST00000590627 TBC1D22AQ8WUA7 517 aa20.04■□□□□ 0.8
GCDH-213ENST00000590627 PIH1D3Q9NQM4 214 aaKnown RBP20.04■□□□□ 0.8
GCDH-213ENST00000590627 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
GCDH-213ENST00000590627 IFNL1Q8IU54 200 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms