RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 SPAG1Q07617 926 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 CT47A1Q5JQC4 288 aaPredicted RBP19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 C11orf57Q6ZUT1 292 aaPredicted RBP19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 ACSBG1Q96GR2 724 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 PPLO60437 1756 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 CTAGE15A4D2H0 777 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 CTAGE8P0CG41 777 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 CTAGE6Q86UF2 777 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 CTAGE4Q8IX94 777 aa19.5■□□□□ 0.71
SMARCA4-215ENST00000590574 DEXIO95424 95 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 CTAGE9A4FU28 777 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 PUF60Q9UHX1 559 aaKnown RBP19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 A0A087WWV3 80 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 MCM7P33993 719 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 PTPN12Q05209 780 aaKnown RBP19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 MCM6Q14566 821 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 TMEM266Q2M3C6 531 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 ZMYM1Q5SVZ6 1142 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 USP32Q8NFA0 1604 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 FGAP02671 866 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 TRIM21P19474 475 aaKnown RBP19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 DNA2P51530 1060 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 CALML4Q96GE6 196 aa19.49■□□□□ 0.71
SMARCA4-215ENST00000590574 AKR1B15C9JRZ8 316 aaPredicted RBP19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 MPHOSPH10O00566 681 aaKnown RBP19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 EVCP57679 992 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 MTX1Q13505 466 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 ZNF174Q15697 407 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 ZNF569Q5MCW4 686 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 MYO6Q9UM54 1294 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 CALM1P0DP23 149 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 CALM2P0DP24 149 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 CALM3P0DP25 149 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 AMPD3Q01432 767 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 CEP112Q8N8E3 955 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 PUS3Q9BZE2 481 aaKnown RBP19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 JADE2Q9NQC1 790 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 KCNJ14Q9UNX9 436 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 RESTQ13127 1097 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 TOB2Q14106 344 aaPredicted RBP19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 FAM114A1Q8IWE2 563 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 TAF4BQ92750 862 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 ENOX2Q16206 610 aaKnown RBP19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 USP31Q70CQ4 1352 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 NRKQ7Z2Y5 1582 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 EXOC1Q9NV70 894 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 STX8Q9UNK0 236 aa19.48■□□□□ 0.71
SMARCA4-215ENST00000590574 VWA3AA6NCI4 1184 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 FGFR1OPO95684 399 aaKnown RBP19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 TCIRG1Q13488 830 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 RAB34Q9BZG1 259 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 TSPYL1Q9H0U9 437 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 M0R2C6 588 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 TDRD12Q587J7 1177 aaKnown RBP19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 HEATR3Q7Z4Q2 680 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 DNAJC10Q8IXB1 793 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 ZBTB9Q96C00 473 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 PDE8AO60658 829 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 IDEP14735 1019 aa19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 RPAP1Q9BWH6 1393 aaPredicted RBP19.47■□□□□ 0.71
SMARCA4-215ENST00000590574 ADGRB2O60241 1585 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 ADD1P35611 737 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 CDC25BP30305 580 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 PPP2R3AQ06190 1150 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 CARD6Q9BX69 1037 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 MAST3O60307 1309 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 PATL2C9JE40 543 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 TSPY3P0CV98 308 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 TSPY8P0CW00 308 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 ADORA1P30542 326 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 UBXN1Q04323 297 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 POSTNQ15063 836 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 CCDC178Q5BJE1 867 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 CACTINQ8WUQ7 758 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 TIGD1Q96MW7 591 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 NFE2L3Q9Y4A8 694 aa19.46■□□□□ 0.71
SMARCA4-215ENST00000590574 CCT6AP40227 531 aaKnown RBP19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 RTEL1Q9NZ71 1219 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 KIAA0754O94854 1291 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 RBM5P52756 815 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 EPHA10Q5JZY3 1008 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 SPTY2D1Q68D10 685 aaPredicted RBP19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 IGSF22Q8N9C0 903 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 CTNND2Q9UQB3 1225 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 SPATA5Q8NB90 893 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 BAG3O95817 575 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 IQUBQ8NA54 791 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 EHBP1Q8NDI1 1231 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 LPIN2Q92539 896 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 IGKV5-2P06315 115 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 CMA1P23946 247 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 PAFAH1B1P43034 410 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 MLKLQ8NB16 471 aa19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 ZNF215Q9UL58 517 aaPredicted RBP19.45■□□□□ 0.7
SMARCA4-215ENST00000590574 SH3TC1Q8TE82 1336 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 ZSCAN29Q8IWY8 852 aaPredicted RBP19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 TRMT44Q8IYL2 757 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms