RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 SYTL4Q96C24 671 aaPredicted RBP22.2■■□□□ 1.14
MBD3-207ENST00000590550 CHMP4CQ96CF2 233 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 MRFAP1L1Q96HT8 127 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 WWC3Q9ULE0 1092 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 CCDC69A6NI79 296 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 SKILP12757 684 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 SYNE3Q6ZMZ3 975 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 TSPYL1Q9H0U9 437 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 TBC1D2BQ9UPU7 963 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 NEDD4P46934 1319 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 DHX16O60231 1041 aaKnown RBP22.19■■□□□ 1.14
MBD3-207ENST00000590550 ADD2P35612 726 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 KIF23Q02241 960 aaPredicted RBP22.19■■□□□ 1.14
MBD3-207ENST00000590550 GIGYF2Q6Y7W6 1299 aaKnown RBP22.19■■□□□ 1.14
MBD3-207ENST00000590550 STK11IPQ8N1F8 1099 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 FBXL16Q8N461 479 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 ZNF532Q9HCE3 1301 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 WDHD1O75717 1129 aaPredicted RBP22.19■■□□□ 1.14
MBD3-207ENST00000590550 CDC25BP30305 580 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
MBD3-207ENST00000590550 ERO1AQ96HE7 468 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 SLC4A9Q96Q91 983 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 KIAA1468Q9P260 1216 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 TRMT112Q9UI30 125 aaKnown RBP22.19■■□□□ 1.14
MBD3-207ENST00000590550 MROH7-TTC4A0A0A0MT08 1334 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 MAP3K15Q6ZN16 1313 aa22.19■■□□□ 1.14
MBD3-207ENST00000590550 IRS4O14654 1257 aaPredicted RBP22.18■■□□□ 1.14
MBD3-207ENST00000590550 CDC27P30260 824 aa22.18■■□□□ 1.14
MBD3-207ENST00000590550 TRDNQ13061 729 aa22.18■■□□□ 1.14
MBD3-207ENST00000590550 RSPH14Q9UHP6 348 aa22.18■■□□□ 1.14
MBD3-207ENST00000590550 CTSWP56202 376 aa22.18■■□□□ 1.14
MBD3-207ENST00000590550 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.18■■□□□ 1.143e-6■■■■■ 28.4
MBD3-207ENST00000590550 POLR3EQ9NVU0 708 aa22.18■■□□□ 1.14
MBD3-207ENST00000590550 ZNF202O95125 648 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 STARD3NLO95772 234 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 KCNG4Q8TDN1 519 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 SLAIN2Q9P270 581 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 ZBTB1Q9Y2K1 713 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 ANKRD18BA2A2Z9 1011 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 BMS1Q14692 1282 aaKnown RBP22.17■■□□□ 1.14
MBD3-207ENST00000590550 ZRSR1Q15695 479 aaKnown RBP22.17■■□□□ 1.14
MBD3-207ENST00000590550 ERCC6LQ2NKX8 1250 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 ALG1Q9BT22 464 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 PLA2G12BQ9BX93 195 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
MBD3-207ENST00000590550 A0A1W2PQ27 194 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 A0A1W2PQ64 194 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 A0A1W2PQD8 194 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 PFKFB1P16118 471 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 METAP2P50579 478 aaKnown RBP eCLIP22.16■■□□□ 1.142e-6■■■□□ 17.6
MBD3-207ENST00000590550 CCDC102BQ68D86 513 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 NBPF11Q86T75 865 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 TICAM2Q86XR7 235 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 ANGEL1Q9UNK9 670 aaKnown RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 MYO5AQ9Y4I1 1855 aaKnown RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 TOGARAM1Q9Y4F4 1720 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 AXDND1Q5T1B0 1012 aaPredicted RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 SMC2O95347 1197 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 SLU7O95391 586 aaKnown RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 SLC3A2P08195 630 aaKnown RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 CCZ1BP86790 482 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 CCZ1P86791 482 aaPredicted RBP22.16■■□□□ 1.14
MBD3-207ENST00000590550 FBXO3Q9UK99 471 aa22.16■■□□□ 1.14
MBD3-207ENST00000590550 SHANK3Q9BYB0 1731 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 YEATS4O95619 227 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 PDE6AP16499 860 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 VPS37DQ86XT2 251 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 VGLL2Q8N8G2 317 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 NAT10Q9H0A0 1025 aaKnown RBP22.15■■□□□ 1.14
MBD3-207ENST00000590550 A0A0G2JS52 829 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 RGS22Q8NE09 1264 aa22.15■■□□□ 1.14
MBD3-207ENST00000590550 SOS2Q07890 1332 aaPredicted RBP22.14■■□□□ 1.14
MBD3-207ENST00000590550 CTDSPL2Q05D32 466 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 APOA5Q6Q788 366 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 NFXL1Q6ZNB6 911 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 BRAPQ7Z569 592 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 LRRN4CLQ8ND94 238 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 CLIC6Q96NY7 704 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 XPO4Q9C0E2 1151 aaKnown RBP22.14■■□□□ 1.14
MBD3-207ENST00000590550 IFNKQ9P0W0 207 aa22.14■■□□□ 1.14
MBD3-207ENST00000590550 PDE8BO95263 885 aa22.14■■□□□ 1.13
MBD3-207ENST00000590550 PTPN21Q16825 1174 aa22.14■■□□□ 1.13
MBD3-207ENST00000590550 KRT40Q6A162 431 aa22.14■■□□□ 1.13
MBD3-207ENST00000590550 FHOD1Q9Y613 1164 aa22.14■■□□□ 1.13
MBD3-207ENST00000590550 AKAP11Q9UKA4 1901 aa22.13■■□□□ 1.13
MBD3-207ENST00000590550 SH2B2O14492 632 aaPredicted RBP22.13■■□□□ 1.13
MBD3-207ENST00000590550 GNL2Q13823 731 aaKnown RBP22.13■■□□□ 1.13
MBD3-207ENST00000590550 LMOD1P29536 600 aaPredicted RBP22.13■■□□□ 1.13
MBD3-207ENST00000590550 SYT10Q6XYQ8 523 aa22.13■■□□□ 1.13
MBD3-207ENST00000590550 C10orf67Q8IYJ2 551 aa22.13■■□□□ 1.13
MBD3-207ENST00000590550 ZMYM6O95789 1325 aa22.12■■□□□ 1.13
MBD3-207ENST00000590550 KRBA2Q6ZNG9 492 aa22.12■■□□□ 1.13
MBD3-207ENST00000590550 CCDC82Q8N4S0 544 aa22.12■■□□□ 1.13
MBD3-207ENST00000590550 AIDAQ96BJ3 306 aa22.12■■□□□ 1.13
MBD3-207ENST00000590550 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
MBD3-207ENST00000590550 CLCN6P51797 869 aa22.12■■□□□ 1.13
MBD3-207ENST00000590550 ZKSCAN3Q9BRR0 538 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms