RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 SLC10A3P09131 477 aa20.7■□□□□ 0.9
H3F3B-208ENST00000589599 CDC42EP5Q6NZY7 148 aa20.7■□□□□ 0.9
H3F3B-208ENST00000589599 HOOK2Q96ED9 719 aa20.7■□□□□ 0.9
H3F3B-208ENST00000589599 FAM163AQ96GL9 167 aaPredicted RBP20.7■□□□□ 0.9
H3F3B-208ENST00000589599 TMEM39BQ9GZU3 492 aa20.7■□□□□ 0.9
H3F3B-208ENST00000589599 IREB2P48200 963 aaKnown RBP20.69■□□□□ 0.9
H3F3B-208ENST00000589599 CTCFP49711 727 aaPredicted RBP20.69■□□□□ 0.9
H3F3B-208ENST00000589599 MECOMQ03112 1051 aa20.69■□□□□ 0.9
H3F3B-208ENST00000589599 LDLRAD1Q5T700 205 aa20.69■□□□□ 0.9
H3F3B-208ENST00000589599 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
H3F3B-208ENST00000589599 MYH13Q9UKX3 1938 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 UNCXA6NJT0 531 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
H3F3B-208ENST00000589599 KIF23Q02241 960 aaPredicted RBP20.68■□□□□ 0.9
H3F3B-208ENST00000589599 MAP3K11Q16584 847 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 RASAL3Q86YV0 1011 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 REM2Q8IYK8 340 aaPredicted RBP20.68■□□□□ 0.9
H3F3B-208ENST00000589599 SLC10A4Q96EP9 437 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 TEPSINQ96N21 525 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 GAKO14976 1311 aa20.68■□□□□ 0.9
H3F3B-208ENST00000589599 FOXN1O15353 648 aa20.67■□□□□ 0.9
H3F3B-208ENST00000589599 IGSF3O75054 1194 aa20.67■□□□□ 0.9
H3F3B-208ENST00000589599 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
H3F3B-208ENST00000589599 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
H3F3B-208ENST00000589599 CA12O43570 354 aa20.66■□□□□ 0.9
H3F3B-208ENST00000589599 USP2O75604 605 aaPredicted RBP20.66■□□□□ 0.9
H3F3B-208ENST00000589599 FAM151AQ8WW52 585 aa20.66■□□□□ 0.9
H3F3B-208ENST00000589599 NSUN4Q96CB9 384 aaKnown RBP20.66■□□□□ 0.9
H3F3B-208ENST00000589599 FZD1Q9UP38 647 aa20.66■□□□□ 0.9
H3F3B-208ENST00000589599 MROH7-TTC4A0A0A0MT08 1334 aa20.66■□□□□ 0.9
H3F3B-208ENST00000589599 GPR75-ASB3A0A0A6YYF3 556 aa20.65■□□□□ 0.9
H3F3B-208ENST00000589599 BTDP43251 543 aa20.65■□□□□ 0.9
H3F3B-208ENST00000589599 ZAP70P43403 619 aa20.65■□□□□ 0.9
H3F3B-208ENST00000589599 ZIC5Q96T25 663 aa20.65■□□□□ 0.9
H3F3B-208ENST00000589599 NOL10Q9BSC4 688 aaKnown RBP20.65■□□□□ 0.9
H3F3B-208ENST00000589599 MAP4K4O95819 1239 aaPredicted RBP20.64■□□□□ 0.89
H3F3B-208ENST00000589599 CYP2E1P05181 493 aaPredicted RBP20.64■□□□□ 0.89
H3F3B-208ENST00000589599 TCP10Q12799 353 aa20.64■□□□□ 0.89
H3F3B-208ENST00000589599 NAA16Q6N069 864 aaPredicted RBP20.64■□□□□ 0.89
H3F3B-208ENST00000589599 ANKRD13AQ8IZ07 590 aa20.64■□□□□ 0.89
H3F3B-208ENST00000589599 LRRCC1Q9C099 1032 aa20.64■□□□□ 0.89
H3F3B-208ENST00000589599 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
H3F3B-208ENST00000589599 SSC5DA1L4H1 1573 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 NFIAQ12857 509 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 DCAF15Q66K64 600 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 CDAN1Q8IWY9 1227 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 IDI2Q9BXS1 227 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
H3F3B-208ENST00000589599 ENTPD3O75355 529 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 BAG3O95817 575 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 MAP3K9P80192 1104 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 ZNF384Q8TF68 577 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 CSRNP1Q96S65 589 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 PIH1D3Q9NQM4 214 aaKnown RBP20.62■□□□□ 0.89
H3F3B-208ENST00000589599 FAM198AQ9UFP1 575 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 THSD7BQ9C0I4 1608 aa20.62■□□□□ 0.89
H3F3B-208ENST00000589599 RGS3P49796 1198 aa20.61■□□□□ 0.89
H3F3B-208ENST00000589599 MKRN3Q13064 507 aaKnown RBP20.61■□□□□ 0.89
H3F3B-208ENST00000589599 SPRYD7Q5W111 196 aa20.61■□□□□ 0.89
H3F3B-208ENST00000589599 CLMNQ96JQ2 1002 aa20.61■□□□□ 0.89
H3F3B-208ENST00000589599 PRDM10Q9NQV6 1147 aa20.61■□□□□ 0.89
H3F3B-208ENST00000589599 PCDHB15Q9Y5E8 787 aa20.61■□□□□ 0.89
H3F3B-208ENST00000589599 CSADQ9Y600 493 aa20.61■□□□□ 0.89
H3F3B-208ENST00000589599 RPAP1Q9BWH6 1393 aaPredicted RBP20.6■□□□□ 0.89
H3F3B-208ENST00000589599 IDH1O75874 414 aaKnown RBP20.6■□□□□ 0.89
H3F3B-208ENST00000589599 HSPA8P11142 646 aaKnown RBP20.6■□□□□ 0.89
H3F3B-208ENST00000589599 LBX1P52954 281 aa20.6■□□□□ 0.89
H3F3B-208ENST00000589599 MAP3K12Q12852 859 aa20.6■□□□□ 0.89
H3F3B-208ENST00000589599 TTF1Q15361 905 aaPredicted RBP20.6■□□□□ 0.89
H3F3B-208ENST00000589599 ZSCAN29Q8IWY8 852 aaPredicted RBP20.6■□□□□ 0.89
H3F3B-208ENST00000589599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.6■□□□□ 0.89
H3F3B-208ENST00000589599 ZNF341Q9BYN7 854 aa20.6■□□□□ 0.89
H3F3B-208ENST00000589599 WDHD1O75717 1129 aaPredicted RBP20.59■□□□□ 0.89
H3F3B-208ENST00000589599 PLCG2P16885 1265 aa20.59■□□□□ 0.89
H3F3B-208ENST00000589599 RHBDL3P58872 404 aa20.59■□□□□ 0.89
H3F3B-208ENST00000589599 SREBF2Q12772 1141 aa20.59■□□□□ 0.89
H3F3B-208ENST00000589599 AAMPQ13685 434 aa20.59■□□□□ 0.89
H3F3B-208ENST00000589599 TMED8Q6PL24 325 aaPredicted RBP20.59■□□□□ 0.89
H3F3B-208ENST00000589599 NPM3O75607 178 aaKnown RBP20.58■□□□□ 0.89
H3F3B-208ENST00000589599 ZBTB48P10074 688 aaPredicted RBP20.58■□□□□ 0.89
H3F3B-208ENST00000589599 PICALMQ13492 652 aa20.58■□□□□ 0.89
H3F3B-208ENST00000589599 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.89
H3F3B-208ENST00000589599 ZFPM1Q8IX07 1006 aa20.58■□□□□ 0.89
H3F3B-208ENST00000589599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.58■□□□□ 0.892e-9■□□□□ 8
H3F3B-208ENST00000589599 WNK4Q96J92 1243 aa20.58■□□□□ 0.89
H3F3B-208ENST00000589599 ELP3Q9H9T3 547 aa20.58■□□□□ 0.89
H3F3B-208ENST00000589599 SAGE1Q9NXZ1 904 aa20.58■□□□□ 0.89
H3F3B-208ENST00000589599 SMARCA5O60264 1052 aaPredicted RBP20.57■□□□□ 0.88
H3F3B-208ENST00000589599 CYP7A1P22680 504 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 TM4SF4P48230 202 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 INHBEP58166 350 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 PPP4CP60510 307 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
H3F3B-208ENST00000589599 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.57■□□□□ 0.88
H3F3B-208ENST00000589599 TEX11Q8IYF3 940 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 WRNIP1Q96S55 665 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 RNF186Q9NXI6 227 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
H3F3B-208ENST00000589599 MYH2Q9UKX2 1941 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms