RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ECM2O94769 699 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-205ENST00000587888 LDHBP07195 334 aaKnown RBP17.64■□□□□ 0.41
ERCC1-205ENST00000587888 EN2P19622 333 aaPredicted RBP17.64■□□□□ 0.41
ERCC1-205ENST00000587888 PRDX5P30044 214 aa17.64■□□□□ 0.41
ERCC1-205ENST00000587888 INPP5BP32019 993 aa17.64■□□□□ 0.41
ERCC1-205ENST00000587888 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.41
ERCC1-205ENST00000587888 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
ERCC1-205ENST00000587888 FAM151AQ8WW52 585 aa17.64■□□□□ 0.41
ERCC1-205ENST00000587888 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
ERCC1-205ENST00000587888 PA2G4Q9UQ80 394 aaKnown RBP17.64■□□□□ 0.41
ERCC1-205ENST00000587888 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
ERCC1-205ENST00000587888 CIAO1O76071 339 aa17.63■□□□□ 0.41
ERCC1-205ENST00000587888 ARMC5Q96C12 935 aa17.63■□□□□ 0.41
ERCC1-205ENST00000587888 FBXO3Q9UK99 471 aa17.63■□□□□ 0.41
ERCC1-205ENST00000587888 TLR2O60603 784 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 MYCP01106 439 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-205ENST00000587888 PHKA1P46020 1223 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 PPATQ06203 517 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 NFIAQ12857 509 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 PPIL2Q13356 520 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 KIF22Q14807 665 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-205ENST00000587888 TMEM106CQ9BVX2 250 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
ERCC1-205ENST00000587888 ARHGAP39Q9C0H5 1083 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
ERCC1-205ENST00000587888 PDE4DIPQ5VU43 2346 aa17.61■□□□□ 0.41
ERCC1-205ENST00000587888 MYH13Q9UKX3 1938 aa17.61■□□□□ 0.41
ERCC1-205ENST00000587888 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
ERCC1-205ENST00000587888 TIMM10P62072 90 aa17.61■□□□□ 0.41
ERCC1-205ENST00000587888 SLC9C1Q4G0N8 1177 aa17.61■□□□□ 0.41
ERCC1-205ENST00000587888 DENND2AQ9ULE3 1009 aa17.61■□□□□ 0.41
ERCC1-205ENST00000587888 AK9Q5TCS8 1911 aa17.6■□□□□ 0.41
ERCC1-205ENST00000587888 ADORA1P30542 326 aa17.6■□□□□ 0.41
ERCC1-205ENST00000587888 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
ERCC1-205ENST00000587888 ZFPM1Q8IX07 1006 aa17.6■□□□□ 0.41
ERCC1-205ENST00000587888 MEIS3Q99687 375 aa17.6■□□□□ 0.41
ERCC1-205ENST00000587888 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
ERCC1-205ENST00000587888 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-205ENST00000587888 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-205ENST00000587888 LACTBP83111 547 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-205ENST00000587888 CCDC102BQ68D86 513 aa17.59■□□□□ 0.41
ERCC1-205ENST00000587888 ZNF333Q96JL9 665 aa17.59■□□□□ 0.41
ERCC1-205ENST00000587888 ZCCHC17Q9NP64 241 aaKnown RBP17.59■□□□□ 0.41
ERCC1-205ENST00000587888 CPA4Q9UI42 421 aa17.59■□□□□ 0.41
ERCC1-205ENST00000587888 ZNF112Q9UJU3 913 aa17.59■□□□□ 0.41
ERCC1-205ENST00000587888 PDHXO00330 501 aa17.58■□□□□ 0.4
ERCC1-205ENST00000587888 SEMA3EO15041 775 aa17.58■□□□□ 0.4
ERCC1-205ENST00000587888 SH3TC2Q8TF17 1288 aa17.58■□□□□ 0.4
ERCC1-205ENST00000587888 COPRSQ9NQ92 184 aa17.58■□□□□ 0.4
ERCC1-205ENST00000587888 ABCF2Q9UG63 623 aa17.58■□□□□ 0.4
ERCC1-205ENST00000587888 SALL1Q9NSC2 1324 aa17.57■□□□□ 0.4
ERCC1-205ENST00000587888 ANKRD23Q86SG2 305 aa17.57■□□□□ 0.4
ERCC1-205ENST00000587888 ZSCAN29Q8IWY8 852 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-205ENST00000587888 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
ERCC1-205ENST00000587888 RGS3P49796 1198 aa17.56■□□□□ 0.4
ERCC1-205ENST00000587888 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
ERCC1-205ENST00000587888 TFCP2Q12800 502 aa17.56■□□□□ 0.4
ERCC1-205ENST00000587888 C17orf99Q6UX52 265 aa17.56■□□□□ 0.4
ERCC1-205ENST00000587888 DZIP1Q86YF9 867 aaKnown RBP17.56■□□□□ 0.4
ERCC1-205ENST00000587888 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
ERCC1-205ENST00000587888 PSMC4P43686 418 aa17.55■□□□□ 0.4
ERCC1-205ENST00000587888 RASGRF1Q13972 1273 aa17.55■□□□□ 0.4
ERCC1-205ENST00000587888 NEUROD6Q96NK8 337 aa17.55■□□□□ 0.4
ERCC1-205ENST00000587888 PCDH10Q9P2E7 1040 aa17.55■□□□□ 0.4
ERCC1-205ENST00000587888 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
ERCC1-205ENST00000587888 ZSWIM8A7E2V4 1837 aa17.55■□□□□ 0.4
ERCC1-205ENST00000587888 FMNL1O95466 1100 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-205ENST00000587888 GNRH1P01148 92 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 GNAI3P08754 354 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 CTGFP29279 349 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 NOL9Q5SY16 702 aaKnown RBP17.54■□□□□ 0.4
ERCC1-205ENST00000587888 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 AKAP2Q9Y2D5 859 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 ZHX2Q9Y6X8 837 aa17.54■□□□□ 0.4
ERCC1-205ENST00000587888 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 A0A1B0GUL7 405 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 PHF20L1A8MW92 1017 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 ENTPD3O75355 529 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 PICALMQ13492 652 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 MOGSQ13724 837 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 SPTY2D1Q68D10 685 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-205ENST00000587888 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 SLF2Q8IX21 1173 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 ARHGAP45Q92619 1136 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
ERCC1-205ENST00000587888 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
ERCC1-205ENST00000587888 DDTLA6NHG4 134 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-205ENST00000587888 CXCL11O14625 94 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 CYP2C8P10632 490 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 HOXD10P28358 340 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 BTDP43251 543 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 PRMT2P55345 433 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 GORABQ5T7V8 394 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms