RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CCDC57Q2TAC2 916 aa10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 PRAMEF18Q5VWM3 479 aa10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 DDX46Q7L014 1031 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 RPAP2Q8IXW5 612 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 ZNF594Q96JF6 807 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 SEC31BQ9NQW1 1179 aa10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 LRRC37AA6NMS7 1700 aa10.44□□□□□ -0.74
NEDD4L-218ENST00000587547 HMMRO75330 724 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 MTX1Q13505 466 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 GRAPQ13588 217 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 SCARF1Q14162 830 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 SIRT2Q8IXJ6 389 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 KLHDC4Q8TBB5 520 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 GRAPLQ8TC17 118 aaPredicted RBP10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 SIL1Q9H173 461 aa10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 PA2G4Q9UQ80 394 aaKnown RBP10.43□□□□□ -0.74
NEDD4L-218ENST00000587547 COL6A3P12111 3177 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 OS9Q13438 667 aaPredicted RBP10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 AMHR2Q16671 573 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 ANKRD18AQ8IVF6 992 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 SSH3Q8TE77 659 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 CELF1Q92879 486 aaKnown RBP10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 ARMC5Q96C12 935 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 CDC5LQ99459 802 aaKnown RBP10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 EPAS1Q99814 870 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 POLLQ9UGP5 575 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 PCDHGA4Q9Y5G9 962 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 CEP290O15078 2479 aa10.42□□□□□ -0.74
NEDD4L-218ENST00000587547 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 AK9Q5TCS8 1911 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 APBB1O00213 710 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 SURF6O75683 361 aaKnown RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 VIL1P09327 827 aaKnown RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 IGHMBP2P38935 993 aaKnown RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 RFX5P48382 616 aaPredicted RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 ZNF280AP59817 542 aaPredicted RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 CAP1Q01518 475 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 SREBF2Q12772 1141 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 ERICH6BQ5W0A0 696 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 PTPN22Q9Y2R2 807 aa10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
NEDD4L-218ENST00000587547 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 RPS8P62241 208 aaKnown RBP10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 GPSM2P81274 684 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 PTPN12Q05209 780 aaKnown RBP10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 G3BP1Q13283 466 aaKnown RBP eCLIP10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 B4GALNT3Q6L9W6 998 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 PARP9Q8IXQ6 854 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 MPHOSPH8Q99549 860 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 PUS3Q9BZE2 481 aaKnown RBP10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 FAM117AQ9C073 453 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 CNNM1Q9NRU3 951 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 EXOC6BQ9Y2D4 811 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 ARAP2Q8WZ64 1704 aa10.4□□□□□ -0.74
NEDD4L-218ENST00000587547 ZNF609O15014 1411 aa10.4□□□□□ -0.75
NEDD4L-218ENST00000587547 PITPNM2Q9BZ72 1349 aa10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 IGHDP01880 384 aa10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 LRRC24Q50LG9 513 aa10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 LDHAL6AQ6ZMR3 332 aa10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 CD99L2Q8TCZ2 262 aa10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 COPRSQ9NQ92 184 aa10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 NPDC1Q9NQX5 325 aaPredicted RBP10.39□□□□□ -0.75
NEDD4L-218ENST00000587547 EYA2O00167 538 aa10.38□□□□□ -0.75
NEDD4L-218ENST00000587547 MAP3K7O43318 606 aa10.38□□□□□ -0.75
NEDD4L-218ENST00000587547 TMC4Q7Z404 712 aa10.38□□□□□ -0.75
NEDD4L-218ENST00000587547 ZNF333Q96JL9 665 aa10.38□□□□□ -0.75
NEDD4L-218ENST00000587547 MYOZ2Q9NPC6 264 aa10.38□□□□□ -0.75
NEDD4L-218ENST00000587547 MYO5AQ9Y4I1 1855 aaKnown RBP10.38□□□□□ -0.75
NEDD4L-218ENST00000587547 IGF2BP3O00425 579 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 PRKG1Q13976 671 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 NBPF9Q3BBW0 867 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 HSP90AB4PQ58FF6 505 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 SPRYD7Q5W111 196 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 ATG9AQ7Z3C6 839 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 SLAIN1Q8ND83 568 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 GMLQ99445 158 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 DCTPP1Q9H773 170 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 BSDC1Q9NW68 430 aaPredicted RBP10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 FZD1Q9UP38 647 aa10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
NEDD4L-218ENST00000587547 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
NEDD4L-218ENST00000587547 CIAO1O76071 339 aa10.36□□□□□ -0.75
NEDD4L-218ENST00000587547 ALDH1A1P00352 501 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms