RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 CDC42EP5Q6NZY7 148 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 NSUN4Q96CB9 384 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 TMEM39BQ9GZU3 492 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 AOC2O75106 756 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 LDHCP07864 332 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 HSPA1AP0DMV8 641 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 HSPA1BP0DMV9 641 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 ZAP70P43403 619 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 AAMPQ13685 434 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 MAP3K11Q16584 847 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 USP40Q9NVE5 1235 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 ANGEL1Q9UNK9 670 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 RPAP1Q9BWH6 1393 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 MYO5AQ9Y4I1 1855 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-210ENST00000586892 UNCXA6NJT0 531 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 SLC10A3P09131 477 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 PRKG1Q13976 671 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 LDLRAD1Q5T700 205 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 ZNF384Q8TF68 577 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 HOOK2Q96ED9 719 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 WBP1LQ9NX94 342 aa16.24■□□□□ 0.19
SMARCA4-210ENST00000586892 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 MAP4K4O95819 1239 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 BTDP43251 543 aa16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 RASAL3Q86YV0 1011 aa16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 AK9Q5TCS8 1911 aa16.23■□□□□ 0.19
SMARCA4-210ENST00000586892 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
SMARCA4-210ENST00000586892 NAA16Q6N069 864 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-210ENST00000586892 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
SMARCA4-210ENST00000586892 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
SMARCA4-210ENST00000586892 BCL11AQ9H165 835 aa16.22■□□□□ 0.19
SMARCA4-210ENST00000586892 RFX7Q2KHR2 1363 aa16.22■□□□□ 0.19
SMARCA4-210ENST00000586892 OTOFQ9HC10 1997 aa16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 USP2O75604 605 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 NFIAQ12857 509 aa16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 PIH1D3Q9NQM4 214 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 FAM198AQ9UFP1 575 aa16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 FZD1Q9UP38 647 aa16.21■□□□□ 0.19
SMARCA4-210ENST00000586892 ENTPD3O75355 529 aa16.2■□□□□ 0.18
SMARCA4-210ENST00000586892 TCP10Q12799 353 aa16.2■□□□□ 0.18
SMARCA4-210ENST00000586892 DCAF15Q66K64 600 aa16.2■□□□□ 0.18
SMARCA4-210ENST00000586892 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-210ENST00000586892 ANKRD13AQ8IZ07 590 aa16.2■□□□□ 0.18
SMARCA4-210ENST00000586892 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-210ENST00000586892 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 WDHD1O75717 1129 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 BAG3O95817 575 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 ATP5JP18859 108 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 RGS3P49796 1198 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 RHBDL3P58872 404 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 KIF23Q02241 960 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 SLC10A4Q96EP9 437 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 ZIC5Q96T25 663 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 NDUFB9Q9Y6M9 179 aa16.19■□□□□ 0.18
SMARCA4-210ENST00000586892 FOXN1O15353 648 aa16.18■□□□□ 0.18
SMARCA4-210ENST00000586892 CA12O43570 354 aa16.18■□□□□ 0.18
SMARCA4-210ENST00000586892 PLCG2P16885 1265 aa16.18■□□□□ 0.18
SMARCA4-210ENST00000586892 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-210ENST00000586892 ANTXR1Q9H6X2 564 aa16.18■□□□□ 0.18
SMARCA4-210ENST00000586892 LAMB1P07942 1786 aa16.18■□□□□ 0.18
SMARCA4-210ENST00000586892 ZBTB48P10074 688 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 CTCFP49711 727 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 PPP4CP60510 307 aa16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 PICALMQ13492 652 aa16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 CERS3Q8IU89 383 aa16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 CLMNQ96JQ2 1002 aa16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 DNAJC2Q99543 621 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 FOCADQ5VW36 1801 aa16.17■□□□□ 0.18
SMARCA4-210ENST00000586892 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 GOLIM4O00461 696 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 CYP7A1P22680 504 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 MAP3K9P80192 1104 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 SPRYD7Q5W111 196 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 ADGRA1Q86SQ6 560 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 ZFPM1Q8IX07 1006 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms