RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	PTCH2	Q9Y6C5	1203 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	ZNF341	Q9BYN7	854 aa		27.41	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	IRF6	O14896	467 aa		27.4	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	BTBD19	C9JJ37	291 aa		27.39	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	GNRH1	P01148	92 aa		27.39	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	PPAT	Q06203	517 aa		27.39	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	ZSWIM8	A7E2V4	1837 aa		27.39	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	CENPF	P49454	3210 aa		27.39	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	RFX5	P48382	616 aa	Predicted RBP	27.38	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	LACTB	P83111	547 aa	Predicted RBP	27.38	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	SLC4A8	Q2Y0W8	1093 aa		27.38	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	FAM151A	Q8WW52	585 aa		27.38	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	MIGA2	Q7L4E1	593 aa		27.37	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	FBXO3	Q9UK99	471 aa		27.37	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	PRMT2	P55345	433 aa		27.36	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	ALDH1L2	Q3SY69	923 aa		27.36	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	GNL3L	Q9NVN8	582 aa	Known RBP	27.36	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	DAGLA	Q9Y4D2	1042 aa		27.36	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	HABP4	Q5JVS0	413 aa	Known RBP	27.35	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	INPP5B	P32019	993 aa		27.34	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	ATG9A	Q7Z3C6	839 aa		27.34	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27.34	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	ARHGAP39	Q9C0H5	1083 aa		27.34	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	CIAO1	O76071	339 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	SLFN5	Q08AF3	891 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	TCP10	Q12799	353 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	ATP2B3	Q16720	1220 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	CDC42EP5	Q6NZY7	148 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	ANKRD23	Q86SG2	305 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	CEP126	Q9P2H0	1117 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	ZNF112	Q9UJU3	913 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	MYH2	Q9UKX2	1941 aa		27.33	■■□□□ 1.97
PLEKHM1-214	ENST00000586084	DOCK2	Q92608	1830 aa		27.32	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	LDHB	P07195	334 aa	Known RBP	27.32	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	UBTFL1	P0CB47	393 aa	Predicted RBP	27.32	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	DIXDC1	Q155Q3	683 aa		27.32	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	SMC4	Q9NTJ3	1288 aa		27.32	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	HDAC5	Q9UQL6	1122 aa		27.32	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	MKI67	P46013	3256 aa	Known RBP	27.31	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	SEMA3E	O15041	775 aa		27.31	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	PRDX5	P30044	214 aa		27.31	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	SIL1	Q9H173	461 aa		27.31	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	DENND2A	Q9ULE3	1009 aa		27.31	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	KCNH4	Q9UQ05	1017 aa		27.31	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	C17orf99	Q6UX52	265 aa		27.3	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	SH3TC2	Q8TF17	1288 aa		27.3	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	SALL1	Q9NSC2	1324 aa		27.3	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	PDHX	O00330	501 aa		27.29	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	MYC	P01106	439 aa	Predicted RBP	27.29	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	NFIA	Q12857	509 aa		27.29	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	NOL9	Q5SY16	702 aa	Known RBP	27.29	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	USP40	Q9NVE5	1235 aa		27.29	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	HOXD10	P28358	340 aa		27.28	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	ZGPAT	Q8N5A5	531 aa	Known RBP	27.28	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	CPA4	Q9UI42	421 aa		27.28	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	IL15	P40933	162 aa	Predicted RBP	27.27	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	FAM198A	Q9UFP1	575 aa		27.27	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	BRCA2	P51587	3418 aa		27.27	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	MGAM	O43451	1857 aa		27.27	■■□□□ 1.96
PLEKHM1-214	ENST00000586084	PSMC4	P43686	418 aa		27.26	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	SRRD	Q9UH36	339 aa		27.26	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	ADGRA2	Q96PE1	1338 aa		27.25	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	PARK7	Q99497	189 aa	Known RBP	27.25	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	CXCL11	O14625	94 aa		27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	ZBTB22	O15209	634 aa		27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	ECM2	O94769	699 aa	Predicted RBP	27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	FMNL1	O95466	1100 aa	Predicted RBP	27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	CT47B1	P0C2W7	299 aa	Predicted RBP	27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	PHKA1	P46020	1223 aa		27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	TRIM47	Q96LD4	638 aa		27.24	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	ENTPD3	O75355	529 aa		27.23	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	RAET1E	Q8TD07	263 aa		27.23	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	API5	Q9BZZ5	524 aa	Known RBP	27.23	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	LRRFIP2	Q9Y608	721 aa	Known RBP	27.23	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	OSBP	P22059	807 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	CTGF	P29279	349 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	RGS3	P49796	1198 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	MOGS	Q13724	837 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	SLF2	Q8IX21	1173 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	CDCA7L	Q96GN5	454 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	IDI2	Q9BXS1	227 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	PICK1	Q9NRD5	415 aa		27.22	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	DOCK1	Q14185	1865 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	MYPN	Q86TC9	1320 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	GRK4	P32298	578 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	CCDC102B	Q68D86	513 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	FASTKD5	Q7L8L6	764 aa	Known RBP	27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	DZIP1	Q86YF9	867 aa	Known RBP	27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	ZFPM1	Q8IX07	1006 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	SCYL3	Q8IZE3	742 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	NKX2-3	Q8TAU0	364 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	COPRS	Q9NQ92	184 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	NOB1	Q9ULX3	412 aa	Known RBP	27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	PTPRF	P10586	1907 aa		27.21	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	GAK	O14976	1311 aa		27.2	■■□□□ 1.95
PLEKHM1-214	ENST00000586084	FCGRT	P55899	365 aa		27.2	■■□□□ 1.94
PLEKHM1-214	ENST00000586084	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.2	■■□□□ 1.94
PLEKHM1-214	ENST00000586084	PA2G4	Q9UQ80	394 aa	Known RBP	27.2	■■□□□ 1.94
PLEKHM1-214	ENST00000586084	ATRNL1	Q5VV63	1379 aa		27.2	■■□□□ 1.94
PLEKHM1-214	ENST00000586084	PDS5A	Q29RF7	1337 aa	Known RBP	27.19	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms